Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J04
(560 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g01575.1 68417.m00205 serine protease inhibitor, Kazal-type f... 32 0.30
At3g62810.1 68416.m07057 complex 1 family protein / LVR family p... 29 2.1
At3g61980.1 68416.m06961 serine protease inhibitor, Kazal-type f... 29 2.8
At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein... 28 3.7
At3g42050.1 68416.m04311 vacuolar ATP synthase subunit H family ... 28 3.7
At5g60920.1 68418.m07642 phytochelatin synthetase, putative / CO... 27 6.5
At1g55350.4 68414.m06326 calpain-type cysteine protease family i... 27 6.5
At1g55350.3 68414.m06325 calpain-type cysteine protease family i... 27 6.5
At1g55350.2 68414.m06324 calpain-type cysteine protease family i... 27 6.5
At1g55350.1 68414.m06323 calpain-type cysteine protease family i... 27 6.5
At5g42620.1 68418.m05188 expressed protein 27 8.6
At3g30843.1 68416.m03970 hypothetical protein 27 8.6
>At4g01575.1 68417.m00205 serine protease inhibitor, Kazal-type
family protein contains Pfam domain PF00050: Kazal-type
serine protease inhibitor domain
Length = 144
Score = 31.9 bits (69), Expect = 0.30
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -1
Query: 464 IPSLKMEHD---GE-CQGAKLASLHPCICTREKDPVCGSDGVTYSNLCLLKCASLSKPSL 297
+PS K+ + GE C+G + P C R DPVCG D VTY C CA +
Sbjct: 47 LPSEKINGEKNRGEFCEGIAKPASCPVQCFRP-DPVCGEDSVTY--WC--GCADALCHGV 101
Query: 296 SIEHTGPCD 270
+ G CD
Sbjct: 102 RVVKQGACD 110
>At3g62810.1 68416.m07057 complex 1 family protein / LVR family
protein contains Pfam PF05347: Complex 1 protein (LYR
family)
Length = 106
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -2
Query: 400 RVYARARKIQFAGATASLTAICAS*NARHCPNQA*ASNTPVLAIITECRRWETKTIRTSI 221
R RA K FAG T L A + + N+ ASN+ + ++ E R T+ I T I
Sbjct: 11 RALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEARE-ATQFISTMI 69
Query: 220 LSQMRTE 200
+ E
Sbjct: 70 VQAKLNE 76
>At3g61980.1 68416.m06961 serine protease inhibitor, Kazal-type
family protein contains Pfam domain PF00050: Kazal-type
serine protease inhibitor domain
Length = 117
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1
Query: 377 DPVCGSDGVTY 345
DPVCG+DGVTY
Sbjct: 52 DPVCGTDGVTY 62
>At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein
contains PF01422: NF-X1 type zinc finger
Length = 912
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 554 CYCT-LEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREK 378
C+C +E CG + + C I ++ HDGEC + +++ C C + K
Sbjct: 222 CFCGGVEDVRRCGHKQFSCGDVCERVLDCNIHNCREICHDGECPPCRERAVYKCSCGKVK 281
Query: 377 D 375
+
Sbjct: 282 E 282
>At3g42050.1 68416.m04311 vacuolar ATP synthase subunit H family
protein identical to probable vacuolar ATP synthase
subunit H (EC 3.6.3.14)(V-ATPase H subunit) (Vacuolar
proton pump H subunit) (Vacuolar proton pump subunit
SFD) SP:Q9LX65 from [Arabidopsis thaliana]; contains
Pfam PF03224: V-ATPase subunit H
Length = 441
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 117 LK*KINSIKMLNYEYVQINKNYILCV 40
LK K +K++N+E ++ KN ILC+
Sbjct: 401 LKAKERVMKLINHENAEVTKNAILCI 426
>At5g60920.1 68418.m07642 phytochelatin synthetase, putative / COBRA
cell expansion protein COB, putative similar to
phytochelatin synthetase GI:29570314; similar to
GB:AAK56072; identified in Roudier, et al, Plant Phys.
(2002) 130:538-548 (PMID:12376623); identical to cDNA
putative phytochelatin synthetase GI:3559804; contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 456
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 535 MPPSVALTEKLTPTNVHWNAPKRLYRL*RWNMMANARELNWRV 407
+PP V T + P VHW+ K+ Y+ W + N+R+
Sbjct: 287 LPPLVQCTRHMCPIRVHWHV-KQNYKE-YWRVKITITNFNYRL 327
>At1g55350.4 68414.m06326 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 227 CSNGFSFPPPTLCYYRKDRCVRCSSL 304
C GF PPT YR+D C L
Sbjct: 1192 CRKGFRHEPPTNVDYRRDMCAHARVL 1217
>At1g55350.3 68414.m06325 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 227 CSNGFSFPPPTLCYYRKDRCVRCSSL 304
C GF PPT YR+D C L
Sbjct: 1192 CRKGFRHEPPTNVDYRRDMCAHARVL 1217
>At1g55350.2 68414.m06324 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 227 CSNGFSFPPPTLCYYRKDRCVRCSSL 304
C GF PPT YR+D C L
Sbjct: 1192 CRKGFRHEPPTNVDYRRDMCAHARVL 1217
>At1g55350.1 68414.m06323 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 227 CSNGFSFPPPTLCYYRKDRCVRCSSL 304
C GF PPT YR+D C L
Sbjct: 1192 CRKGFRHEPPTNVDYRRDMCAHARVL 1217
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 527 VCGSNGKTYANKC--SLECTQKIIPSLKMEHDGECQGA 420
VC S ++Y C SL+C+ + + S E D EC G+
Sbjct: 786 VCHSACQSYNMACGASLDCSDQTLFSTAEEGDAECTGS 823
>At3g30843.1 68416.m03970 hypothetical protein
Length = 310
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 261 SVGGGKLKPFEQVYCHRCELKGECL 187
+VG K + E CHRC +KG CL
Sbjct: 250 NVGRVKKRHVEST-CHRCGMKGHCL 273
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,586,302
Number of Sequences: 28952
Number of extensions: 236244
Number of successful extensions: 573
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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