Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J02
         (623 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CA658 Cluster: hypothetical protein TTHERM_0064...    35   1.8  
UniRef50_Q4Z5Q1 Cluster: Putative uncharacterized protein; n=2; ...    33   7.3  
UniRef50_A2U0B7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.7  

>UniRef50_UPI00006CA658 Cluster: hypothetical protein
           TTHERM_00646790; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00646790 - Tetrahymena
           thermophila SB210
          Length = 171

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 413 IIKSLNN-FKK*YLKELSSSELIKRQQTTLNKKTP 312
           I K +NN FKK YLKE+  SE  K Q+T  N++ P
Sbjct: 99  INKKINNYFKKKYLKEIQLSEFNKTQKTQTNQQNP 133


>UniRef50_Q4Z5Q1 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 890

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 204 EFSCKS-NMILIELLCFYFSFNHNVKYLYIM*YKNTLWRFLI 326
           E  CK+ + +L EL+CFY +  +  KY YI  YKN  + F +
Sbjct: 74  EIKCKNKSCVLFELICFYKN-GYIKKYNYICTYKNNNFEFYL 114


>UniRef50_A2U0B7 Cluster: Putative uncharacterized protein; n=1;
           Polaribacter dokdonensis MED152|Rep: Putative
           uncharacterized protein - Polaribacter dokdonensis
           MED152
          Length = 290

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 119 VLNKHLKLYQYGGF*LLMSNIVKHDKEYRIF 211
           +LNKHL LY Y G+ L M+N+++      +F
Sbjct: 242 LLNKHLVLYAYTGYTLRMNNVLRDKDRENVF 272


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,793,854
Number of Sequences: 1657284
Number of extensions: 8386558
Number of successful extensions: 12872
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12868
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)