Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_J01
(564 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 52 3e-07
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 51 6e-07
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 49 2e-06
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 45 5e-05
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 42 3e-04
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.013
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 36 0.023
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 33 0.12
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 33 0.21
SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_17982| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 59.7 bits (138), Expect = 2e-09
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Frame = +2
Query: 62 QALTPLEVWLHPNYNDDYSAADLAIMKFN-RFEYTEYVQPICLWGPVYDKTNLFGKEATV 238
Q + ++ HP ++ +D+A+++ + TEYV+P+CL + + +
Sbjct: 1240 QIIPSAGIYSHPRFSWRTYDSDIALIRLRWKANITEYVRPVCLPNGYQRRLVKPRAKGVM 1299
Query: 239 VGFGSTEANRQSDILRSANTMVQEDTVCVN-FEPNVYRKLMNEFTFCAGYGPESAINPRN 415
+G+G TE R S L+ A V C +E + N CAGY +S + N
Sbjct: 1300 LGWGVTENKRPSKTLKEAIVPVVNHNACKKAYENETWPVTSN--MLCAGYKNKSR-DSCN 1356
Query: 416 GDSGGGLIVRTIQPDHKVSWFLRGVLS----KCGVSPGQ 520
DSGGG + + K WF+ G++S KCGV PG+
Sbjct: 1357 RDSGGGFVFYDSRA-RKRKWFIGGIVSWGNPKCGV-PGK 1393
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 56.4 bits (130), Expect = 2e-08
Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 5/190 (2%)
Frame = +2
Query: 8 FLVVAGTNNYKDLNQIGRQALTPLEVWLHPNYNDDYSAADLAIMKFN---RFEYTEYVQP 178
+ VV G + + + +Q+L ++ HP YND D+A+++ +F+ V
Sbjct: 487 YTVVVGAHKKRGSTSV-QQSLRLSQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKVGT 545
Query: 179 ICLWGPVYDKTNLFGKEATVVGFGSTEANRQS--DILRSANTMVQEDTVCVNFEPNVYRK 352
+CL D+ GK + G+G+ + Q DIL+ A + C Y
Sbjct: 546 VCLT----DQRPAPGKRCYITGWGAINGDTQQSPDILQQAMLPIASHENC----RRKYGD 597
Query: 353 LMNEFTFCAGYGPESAINPRNGDSGGGLIVRTIQPDHKVSWFLRGVLSKCGVSPGQTECD 532
+ + CAG A NGDSGG L+ + SWFL G VS G C
Sbjct: 598 VSSTAHLCAGEARSDAAGGCNGDSGGPLVC-----EDNGSWFLHG-----AVSYGLRNCP 647
Query: 533 PXYYVVFTDV 562
+Y VF V
Sbjct: 648 TTHYTVFARV 657
Score = 37.9 bits (84), Expect = 0.006
Identities = 49/190 (25%), Positives = 74/190 (38%), Gaps = 5/190 (2%)
Frame = +2
Query: 8 FLVVAGTNNYKDLNQIGRQALTPLEVWLHPNYNDDYSAADLAIMKFN---RFEYTEYVQP 178
+ VV G + + + +Q+L ++ HP YND D+A+++ +F+ V
Sbjct: 158 YTVVVGAHKKRGSTSV-QQSLRLSQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKVGT 216
Query: 179 ICLWGPVYDKTNLFGKEATVVGFGSTEANRQSDILRSANTMVQEDTVCVNFE--PNVYRK 352
+CL D+ GK + G R+ R N M + + +F N RK
Sbjct: 217 VCL----TDQRPAPGKRCYITG----AIIRELHTFRRENRMGENNLRARDFSSFENKRRK 268
Query: 353 LMNEFTFCAGYGPESAINPRNGDSGGGLIVRTIQPDHKVSWFLRGVLSKCGVSPGQTECD 532
+ A NGDSGG L+ + SWFL G VS G C
Sbjct: 269 FREK-----REARSDAAGGCNGDSGGPLVC-----EDNGSWFLHG-----AVSYGLRNCP 313
Query: 533 PXYYVVFTDV 562
+Y VF V
Sbjct: 314 TTHYTVFARV 323
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 52.0 bits (119), Expect = 3e-07
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Frame = +2
Query: 62 QALTPLEVWLHPNYNDDYSAADLAIMKFNRFEYTE-YVQPICLWGPVYDKTNLFGKEATV 238
Q++ ++ +P +N+ + D+A+++ R T +V P+CL PV GK +
Sbjct: 13 QSIKVKKLVYNPGFNERHYRNDIALLELERPVLTNPHVSPVCL-PPVNAGKVPVGKNCFI 71
Query: 239 VGFGST-EANRQSDILRSANTMVQEDTVCVNFEPNVYRKLMNEFTFCAGYGPESAINPRN 415
G+G E + +++ L+ A +V + C + + + CAG GP
Sbjct: 72 TGWGRVFEGSDEAEFLQEAELVVASNAKCDKKNGELL-PVDDASMVCAG-GPGRG--GCQ 127
Query: 416 GDSGGGLIVRTIQPDHKVSWFLRGVLSKCGVSPGQTECDPXYYVVFTDV 562
GDSGG L+ + W LRG+ VS G EC +Y VFT V
Sbjct: 128 GDSGGPLVC-----NEAGRWVLRGI-----VSWGSRECSTEFYTVFTRV 166
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 51.2 bits (117), Expect = 6e-07
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Frame = +2
Query: 89 LHPNYNDDYSAADLAIMKFNR-FEYTEYVQPICLWGPVYDKTNLFGK-EATVVGFGSTE- 259
+HP+Y+ D +D+A+++ + +T+YV+PICL D L T+ G+G +
Sbjct: 198 IHPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISGWGKRKL 257
Query: 260 -ANRQSDILRSANTMVQEDTVCVNFEPNVYRKLMNEFTFCAGYGPESAINPRNGDSGG 430
+R ++ L A + + C P+ ++ FCAG+ S + GDSGG
Sbjct: 258 WRDRVANRLHEATVPIVDIQTCRKAHPDY---IVTANMFCAGFENSSRGDACQGDSGG 312
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 51.2 bits (117), Expect = 6e-07
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Frame = +2
Query: 83 VWLHPNYNDDYSAA-DLAIMKF-NRFEYTEYVQPICLWGPVYDKTNLFGKEATVVGFGST 256
+ +H + D S D+AIMK N + P CL G +YD+ G V G+G T
Sbjct: 363 IHMHTRFMTDGSYGYDIAIMKLANPAPIGHTISPACLPG-LYDQVTS-GTMCYVTGWGMT 420
Query: 257 E-ANRQSDILRSANTMVQEDTVCVNFEPNVYRKLMNEFTFCAGYGPESAINPRNGDSGGG 433
E N + +L+ A V C N +RK+ CAG G S+I+ +GDSGG
Sbjct: 421 EYGNAGARLLQQARIPVVSSEECERVN-NKHRKVDKVTMLCAGNGGNSSISGCHGDSGGP 479
Query: 434 LIVRTIQPDHKVSWFLRGVL 493
+ + D + W LRG +
Sbjct: 480 FV--CMGGDGR--WVLRGAV 495
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 50.4 bits (115), Expect = 1e-06
Identities = 47/161 (29%), Positives = 66/161 (40%), Gaps = 4/161 (2%)
Frame = +2
Query: 92 HPNYNDDYSAADLAIMKFNR---FEYTEYVQPICLWGPVYDKTNLFGKEATVVGFGSTEA 262
HP Y+D D+A+++ +R F+ V CL ++ GK + G+GST
Sbjct: 160 HPEYDDRKIKNDIALLELSRPVKFDREGKVGTACLT----NQQPTPGKRCYITGWGSTIG 215
Query: 263 NRQSD-ILRSANTMVQEDTVCVNFEPNVYRKLMNEFTFCAGYGPESAINPRNGDSGGGLI 439
S IL+ A + C N Y + + CAG A NGDSGG L+
Sbjct: 216 TGNSPRILQQAMLPIASHNDC----KNKYYGVSSTAHLCAGEARSGASGGCNGDSGGPLV 271
Query: 440 VRTIQPDHKVSWFLRGVLSKCGVSPGQTECDPXYYVVFTDV 562
+ W+L G VS G+ C YY VF V
Sbjct: 272 C-----EDNGRWYLHG-----AVSYGKLHCPTTYYTVFARV 302
Score = 35.9 bits (79), Expect = 0.023
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 4/190 (2%)
Frame = +2
Query: 5 RFLVVAGTNNYKDLNQIGRQALTPLEVWLHPNYNDDYSAADLAIMKFNRFEY-TEYVQPI 181
++ V+ G+++ +D ++ Q + V+ H ++ D+A+++ R + V
Sbjct: 375 KYTVIVGSHS-RDASEPSAQNIKVRRVYRHRGFSMANYVDDIALLELERSAVINDKVSTA 433
Query: 182 CLWGPVYDKTNLFGKEATVVGFGSTEANRQSDILRSANTMVQEDTVCVNFEP--NVYRKL 355
CL P + G + G+G ++ D+ A T+ Q V+ E Y +
Sbjct: 434 CL--PSGEPK--VGAICYIAGWGRLQS--LGDV---ALTLQQAKVPIVSKEDCKRAYGAI 484
Query: 356 MNEFT-FCAGYGPESAINPRNGDSGGGLIVRTIQPDHKVSWFLRGVLSKCGVSPGQTECD 532
+ ++ C G+ E+A + GDSGG L+ + + W L G S G S C
Sbjct: 485 IRPYSHICVGFNTENAASSCQGDSGGPLVC-----EEEGRWVLHGATS-FGKS-----CS 533
Query: 533 PXYYVVFTDV 562
P +Y V+T V
Sbjct: 534 PKHYSVYTRV 543
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 49.2 bits (112), Expect = 2e-06
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 4/143 (2%)
Frame = +2
Query: 80 EVWLHPNYNDDYSAADLAIMKFNR--FEYTEYVQPICLWGPVYDKTNL-FGKEATVVGFG 250
++ +HP+Y++ DLA+++ +T++V+P+CL P +L G TV G+G
Sbjct: 517 QICIHPDYHEIKLTNDLALIRLRTPITTFTKHVRPVCL--PTSATPDLAVGTNCTVTGYG 574
Query: 251 STEANRQ-SDILRSANTMVQEDTVCVNFEPNVYRKLMNEFTFCAGYGPESAINPRNGDSG 427
N S LR A V + C N +N+ CAGY I+ GDSG
Sbjct: 575 RVGENEDLSTQLRHATIPVLSVSEC---RANYSGHTINDKVICAGY-EGGKIDSCKGDSG 630
Query: 428 GGLIVRTIQPDHKVSWFLRGVLS 496
G + + P + L G +S
Sbjct: 631 GPFVCK--DPRVTSRFILHGAVS 651
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 49.2 bits (112), Expect = 2e-06
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Frame = +2
Query: 62 QALTPLEVWLHPNYNDDYSAADLAIMKFNR-FEYTEYVQPICLWGPVYDKTNLFGKEATV 238
Q T +V +HPNY + +D+A+++ + + V ICL P ++ GK +
Sbjct: 1401 QDFTVRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICL--PKEGESEAVGKNCYI 1458
Query: 239 VGFGSTEANRQ-SDILRSANTMVQEDTVCVNFEPNVYRKLMNEFTFCAGYGPESAINPRN 415
G+G T NR + +L+ A + C ++ C G+G S I+
Sbjct: 1459 TGWGRTGYNRPGASVLQEAMMPIVSQQTCAAAMRRW--GVVTSRMICGGFGAGSTISGCF 1516
Query: 416 GDSGGGLIVRTIQPDHKVSWFLRGVLS 496
GDSGG + Q +K W ++GV+S
Sbjct: 1517 GDSGGPFV---CQGSNK-RWNIQGVVS 1539
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 48.8 bits (111), Expect = 3e-06
Identities = 48/151 (31%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Frame = +2
Query: 80 EVWLHPNYNDDYSAADLAIMKFN-RFEYTEYVQPICLWGPVYDKTNLF--GKEATVVGFG 250
E+ HP ++ ADLA++K + +EYV+PICL D+ +L K VG+G
Sbjct: 187 EIRTHPQFDHVLFDADLALIKLDGEAIISEYVRPICL-PETDDQASLISPSKFGMAVGWG 245
Query: 251 STEANRQSDI--------LRSANTMVQEDTVCVN-FEPNVYRKLMNEFTFCAGYGPESAI 403
T RQ D+ L+ + VC F+ Y N FCAG
Sbjct: 246 KT-VGRQGDVSVKNLADALKETCMPIVNSHVCNQAFQDEGYSVTPN--MFCAGQA-SGGK 301
Query: 404 NPRNGDSGGGLIVRTIQPDHKVSWFLRGVLS 496
+ GDSGGG + + K WFL GV+S
Sbjct: 302 DICQGDSGGGFV---LYDSAKQKWFLGGVVS 329
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 44.8 bits (101), Expect = 5e-05
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 5/172 (2%)
Frame = +2
Query: 14 VVAGTNNYKDLNQIGRQALTPLE-VWLHPNYNDDYSAADLAIMKFNR-FEYTEYVQPICL 187
V+ ++ N G + + P+E + H NY+ + D A++K R +T+YVQP+CL
Sbjct: 350 VLTVLGEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCL 409
Query: 188 WGPVYDKTNLFGKEATVVGFGST--EANRQSDILRSANTMVQEDTVCVNFEPNVYRKLMN 361
P D G V G+GST + + L+ + + C RK+
Sbjct: 410 --P--DSDFPAGTLCYVTGWGSTNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITP 465
Query: 362 EFTFCAG-YGPESAINPRNGDSGGGLIVRTIQPDHKVSWFLRGVLSKCGVSP 514
CAG G A+ +GDSGG L+ + WFL G+ S V P
Sbjct: 466 RMR-CAGTEGVAKAV--CSGDSGGPLVC-----ERGGRWFLMGLSSWGWVCP 509
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 44.4 bits (100), Expect = 7e-05
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Frame = +2
Query: 47 NQIGRQALTPLE-VWLHPNYNDDYSAADLAIMKFNR-FEYTEYVQPICLWGPVYDKTNLF 220
N G + + P+E + H NY+ + D A++K R +T+YVQP+CL P D
Sbjct: 610 NVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCL--P--DSDFPA 665
Query: 221 GKEATVVGFGST--EANRQSDILRSANTMVQEDTVCVNFEPNVYRKLMNEFTFCAG-YGP 391
G V G+GST + + L+ + + C RK+ CAG G
Sbjct: 666 GTLCYVTGWGSTNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMR-CAGTEGV 724
Query: 392 ESAINPRNGDSGGGLIVRTIQPDHKVSWFLRGVLSKCGVSP 514
A+ +GDSGG L+ + WFL G+ S V P
Sbjct: 725 AKAV--CSGDSGGPLVC-----ERGGRWFLMGLSSWGWVCP 758
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 42.3 bits (95), Expect = 3e-04
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 13/199 (6%)
Frame = +2
Query: 5 RFLVVAGTNNYKDLNQIGRQALTPLEVWLHPNYNDDY-SAADLAIMKFNRFEY-TEYVQP 178
++ VV G + K + Q + V H Y + +A D+A++K + T++V
Sbjct: 82 KYKVVLGDVDRKKIEG-SEQMIDVAMVIKHYAYGNPVPNANDVALLKLRDYPTKTDFVNT 140
Query: 179 ICLWGPVYDKTNLFGKEATVVGFG-STEANRQSDILRSANTMVQEDTVC---------VN 328
+CL P Y GK+ + G+G S ++ L+ A+ V + C +
Sbjct: 141 VCL--PQYMDHVEIGKDCFITGWGRSYYPGPTANKLQQADLRVVSNRACSERHMGSKNMR 198
Query: 329 FEPNVYRKLMNEFTFCAGYGPESAINPRNGDSGGGLIVRTIQPDHKVSWFLRGVLSKCGV 508
E +R + E CAG ++ N NGDSGG + R W L+GV V
Sbjct: 199 LENGTWR--VTETMLCAGDAGKTGKNGCNGDSGGPFVCRNTAG----QWVLQGV-----V 247
Query: 509 SPGQTECDPX-YYVVFTDV 562
S G EC ++ VF V
Sbjct: 248 SWGDPECSSANHFSVFARV 266
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 40.3 bits (90), Expect = 0.001
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 4/160 (2%)
Frame = +2
Query: 62 QALTPLEVWLHPNYNDDYSAADLAIMKFNR-FEYTEYVQPICLWGPVYDKTNLFGKEATV 238
Q+L+ +++HP YN DLA+++ + E+ V PIC+ V ++ G+ V
Sbjct: 1309 QSLSIKAIFVHPQYNSSSHEHDLAVLQLQQPAEFNSRVSPICI---VANEEVQAGRACAV 1365
Query: 239 VGFGSTEANRQSDI-LRSANTMVQEDTVCVNFEPNVYRKLMNEFTFCAGYGPESAINPRN 415
G+G + R + I L + V T C + V +++ CAG + N
Sbjct: 1366 AGWGQSYLPRITTIPLLTRRMRVIGRTDCAAAQSRVTAQML-----CAGPAAGESDN-CF 1419
Query: 416 GDSGGGLIVRTIQPDHKVSWFLRGVLSK--CGVSPGQTEC 529
GD G L+ + + WF+ G ++K G G C
Sbjct: 1420 GDGGSPLMCQGASRE----WFVAGDVTKATAGSQNGPLNC 1455
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 39.1 bits (87), Expect = 0.002
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Frame = +2
Query: 92 HPNYNDDY-SAADLAIMKFNRFEY-TEYVQPICLWGPVYDKTNLFGKEATVVGFGS-TEA 262
HP+Y S+ D+A+++ +R T + C+ N G + G+G+ +
Sbjct: 710 HPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPN--GTMCYITGWGTLSSG 767
Query: 263 NRQSDILRSANTMVQEDTVCVNFEPNVYRKLMNEFTFCAGYGPESAINPRNGDSGGGLIV 442
Q + L A ++ + C P K+ + CAG PE ++ GDSGG L+
Sbjct: 768 GSQPEALNQAVVPLRTRSECERSYPG---KISADM-ICAG-NPEGGVDTCQGDSGGPLVC 822
Query: 443 RTIQPDHKVSWFLRGVLS 496
+ H WFL GV S
Sbjct: 823 Q-----HGNQWFLTGVTS 835
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 36.7 bits (81), Expect = 0.013
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 7/169 (4%)
Frame = +2
Query: 11 LVVAGTNNYKDLNQIGRQALTPLEVWLHPNYN---DDYSAADLAIMKFNRFEY-TEYVQP 178
++ G +N + + Q + +++LH +YN Y+ D+A+++ + T YVQP
Sbjct: 269 IISLGGHNKTGIMSV-EQRIGIAKIYLHADYNLYPHQYNN-DVALIRLAKPAIRTRYVQP 326
Query: 179 ICLWGPVYDKTNLF--GKEATVVGFGSTEANRQS-DILRSANTMVQEDTVCVNFEPNVYR 349
+CL D T F G E + G+G + S +IL+ A T + C + Y
Sbjct: 327 VCL----ADGTVSFPPGTECWITGWGRLHSGGASPEILQQAKTKLLSYAECT--KNGSYE 380
Query: 350 KLMNEFTFCAGYGPESAINPRNGDSGGGLIVRTIQPDHKVSWFLRGVLS 496
T P I+ GDSGG L+ ++ W L GV S
Sbjct: 381 AAAVSSTMLCAQVP--GIDTCQGDSGGPLVC-----ENNNKWTLVGVTS 422
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 35.9 bits (79), Expect = 0.023
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Frame = +2
Query: 125 DLAIMKF-NRFEYTEYVQPICLWGPVYDKTNLFGKEATVVGFGSTE-ANRQSDILRSANT 298
D+A+++ ++T YV PICL P + GK V G+G + + ILR A
Sbjct: 79 DVALLRLATPAKFTNYVYPICLL-PQGARFRP-GKYCYVTGWGVLQWKGTKPAILREAQV 136
Query: 299 MVQEDTVCVNFEPNVYRKLMNEFTFCAGYGPESAINPRNGDSGGGLIVRTIQPDHKVSWF 478
+ C + P Y ++ CAG+ ++ DSGG L + + W+
Sbjct: 137 QLVPQDKCNS--PQSYNGEVSGRALCAGF-ERGGVDACQYDSGGPLAC-----EERGRWY 188
Query: 479 LRGVLS---KCG 505
L GV+S +CG
Sbjct: 189 LTGVVSYGHECG 200
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 35.5 bits (78), Expect = 0.030
Identities = 24/63 (38%), Positives = 27/63 (42%)
Frame = +2
Query: 374 CAGYGPESAINPRNGDSGGGLIVRTIQPDHKVSWFLRGVLSKCGVSPGQTECDPXYYVVF 553
CAG A NGDSGG L+ + SWFL G VS G C +Y VF
Sbjct: 935 CAGEARSDAAGGCNGDSGGPLVC-----EDNGSWFLHG-----AVSYGMKYCPTTHYTVF 984
Query: 554 TDV 562
V
Sbjct: 985 ARV 987
Score = 32.7 bits (71), Expect = 0.21
Identities = 24/63 (38%), Positives = 26/63 (41%)
Frame = +2
Query: 374 CAGYGPESAINPRNGDSGGGLIVRTIQPDHKVSWFLRGVLSKCGVSPGQTECDPXYYVVF 553
CAG A NGDSGG L+ + W L G VS G C YY VF
Sbjct: 662 CAGEARVGAAGGCNGDSGGPLVC-----EQSGVWVLHG-----AVSYGARWCPTDYYTVF 711
Query: 554 TDV 562
T V
Sbjct: 712 TRV 714
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 34.7 bits (76), Expect = 0.053
Identities = 15/62 (24%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 5 RFLVVAGTNNYKDLNQIGRQALTPLEVWLHPNYNDDYSAADLAIMKF-NRFEYTEYVQPI 181
++ ++ G +N +++N++ + L +V HP YN+ + D+A+++ + + + V P+
Sbjct: 527 QYQIIVGEHN-RNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALIELASPAKLSSRVNPV 585
Query: 182 CL 187
CL
Sbjct: 586 CL 587
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 33.5 bits (73), Expect = 0.12
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +2
Query: 236 VVGFGST-EANRQSDILRSANTMVQEDTVCVNFEPNVYRKLMNEFTFCAGYGPESAINPR 412
+ G+G E + +++ L+ A +V + C + + + CAG GP
Sbjct: 531 IAGWGRVFEGSDEAEFLQEAELVVASNAKCDKKNGELL-PVDDASMVCAG-GPGRG--GC 586
Query: 413 NGDSGGGLIVRTIQPDHKVSWFLRGVLSKCGVSPGQTECDPXYYVVFTDV 562
GDSGG L+ + W LRG+ VS G EC +Y VFT V
Sbjct: 587 QGDSGGPLVC-----NEAGRWVLRGI-----VSWGSRECSTEFYTVFTRV 626
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 32.7 bits (71), Expect = 0.21
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 4/171 (2%)
Frame = +2
Query: 62 QALTPLEVWLHPNYNDDYSAADLAIMKFNR-FEYTEYVQPICLWGPVYDKTNLFGKEATV 238
Q + ++ H ++ D+A+++ R + + V CL P G + +
Sbjct: 13 QVIKVKRIFKHSGFSMWRYRDDIALLQLERPAQLNDRVNVACLPSP--GDVPPVGSKCWL 70
Query: 239 VGFGST--EANRQSDILRSANTMVQEDTVCVNFEPNVYRKLMNEFT-FCAGYGPESAINP 409
G+G + DIL+ A + C Y + +T CAG +A
Sbjct: 71 TGWGRQVDSSGPLPDILQQARIPIASHEDC----KRKYGSGIYSYTHLCAGEAKPNAAGA 126
Query: 410 RNGDSGGGLIVRTIQPDHKVSWFLRGVLSKCGVSPGQTECDPXYYVVFTDV 562
GDSGG L+ + W L GV VS G C+ Y V+T V
Sbjct: 127 CQGDSGGPLVC-----ERNGQWTLYGV-----VSFGAGNCEVTSYTVYTKV 167
>SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1879
Score = 28.7 bits (61), Expect = 3.5
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +2
Query: 101 YNDDYSAADLAIMKFNRFEYTEYVQPICLWGPVYDKTNL--FGKEATVVGFGSTEANRQS 274
Y DD++A D N F++ QP V K FG + +G R S
Sbjct: 555 YYDDFAAFDEEEENENLFQFHLETQPSIQQTTVTGKRPFSEFGAQKAELGRRDENNPRPS 614
Query: 275 DILRSANTMVQEDTVCVNFEPNV 343
+ SAN + T+ F PN+
Sbjct: 615 GGMASANAAPKPMTMANKFNPNI 637
>SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 344 YRKLMNEFTFCAGYGPESAINPRNGDSGGGLIVRTIQPDHKVSWFL 481
Y+ L N + G ESA++ + D G+I+R +QP K FL
Sbjct: 262 YQYLSNNYMHLCGT-LESAVSSKVKDEIAGVILRVLQPVGKAQEFL 306
>SB_17982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 173 QPICLWGPVYDKTNLFGKEATVVGFGSTEA--NRQSDILRSANTMVQ 307
+P C+W P+ K + GK +G + ++ N Q + T+ Q
Sbjct: 49 EPCCIWEPIKSKPSESGKFVRSIGIQTDDSKDNTQETFISHVQTVTQ 95
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,224,482
Number of Sequences: 59808
Number of extensions: 346644
Number of successful extensions: 676
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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