Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_J01
         (564 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    56   1e-08
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    34   0.081
U70852-10|AAO91718.1|  505|Caenorhabditis elegans Hypothetical p...    27   9.3  
U70852-9|ABB51183.1|  784|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U70852-8|ABB51182.1|  868|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AC006742-6|AAF60498.1|  778|Caenorhabditis elegans Hypothetical ...    27   9.3  
AC006742-3|AAF60501.1|  778|Caenorhabditis elegans Hypothetical ...    27   9.3  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
 Frame = +2

Query: 29  NNYKDLNQIGRQALTPLEVWLHPNYNDDYSAADLAIMK--FNRFEYTEYVQPICLWGPVY 202
           NN  D N+   Q      +  +P Y D +S  D+AI++  +   E+ EY QPICL  P  
Sbjct: 89  NNQTDGNE---QIFYLQRIHFYPLYKDIFSH-DIAILEIPYPGIEFNEYAQPICL--PSK 142

Query: 203 DKTNLFGKEATVVGFGSTEANRQSDILRSANTMVQEDTVCVNFEPNVYRKLMNEFTFCAG 382
           D     G++  V G+GS    R ++ L++A   +     CVN    +Y   M+   FCAG
Sbjct: 143 DFVYTPGRQCVVSGWGSM-GLRYAERLQAALIPIINRFDCVN-SSQIYSS-MSRSAFCAG 199

Query: 383 YGPESAINPRNGDSGGGLIVR 445
           Y  E  I+   GDSGG    R
Sbjct: 200 Y-LEGGIDSCQGDSGGPFACR 219


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 33.9 bits (74), Expect = 0.081
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = +2

Query: 80  EVWLHPNYNDDYSAADLAIMKFNRFEYTEYVQPICLWGPVYDKTNLFG--KEATVVGFGS 253
           E ++H  YN+  +  D+A+++ +       ++P+CL   V+D + L    K   V+G+G 
Sbjct: 109 EAYIHSGYNNQTADNDIALLRISSDLSKLGIKPVCL---VHDDSKLLKQYKNGVVIGYGL 165

Query: 254 TEANRQSDILRSANTMVQEDT 316
           T     S   +  N+   + T
Sbjct: 166 TLGEDSSGEPKLINSQTLQST 186


>U70852-10|AAO91718.1|  505|Caenorhabditis elegans Hypothetical
           protein F45E4.7b protein.
          Length = 505

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 450 IVLTIKPPPLSPLRGLI 400
           I+L IKPP L+P+ GLI
Sbjct: 26  IILQIKPPDLTPIVGLI 42


>U70852-9|ABB51183.1|  784|Caenorhabditis elegans Hypothetical
           protein F45E4.7c protein.
          Length = 784

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 450 IVLTIKPPPLSPLRGLI 400
           I+L IKPP L+P+ GLI
Sbjct: 305 IILQIKPPDLTPIVGLI 321


>U70852-8|ABB51182.1|  868|Caenorhabditis elegans Hypothetical
           protein F45E4.7a protein.
          Length = 868

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 450 IVLTIKPPPLSPLRGLI 400
           I+L IKPP L+P+ GLI
Sbjct: 389 IILQIKPPDLTPIVGLI 405


>AC006742-6|AAF60498.1|  778|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.2 protein.
          Length = 778

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +2

Query: 188 WGPVYDKTNLFGKEATVVGF-----GSTEANRQSDILRSANTMVQE 310
           WG V + TNL G E  +  F        + NR++D+  + +T+ QE
Sbjct: 621 WGTVRETTNLHGAEDEIRDFLKIDRHDFQQNRKADLKSAMSTLQQE 666


>AC006742-3|AAF60501.1|  778|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.6 protein.
          Length = 778

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +2

Query: 188 WGPVYDKTNLFGKEATVVGF-----GSTEANRQSDILRSANTMVQE 310
           WG V + TNL G E  +  F        + NR++D+  + +T+ QE
Sbjct: 621 WGTVRETTNLHGAEDEIRDFLKIDRHDFQQNRKADLKSAMSTLQQE 666


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,876,203
Number of Sequences: 27780
Number of extensions: 271644
Number of successful extensions: 583
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)