Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I23
(342 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 159 6e-40
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 159 6e-40
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 157 2e-39
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 157 2e-39
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 157 2e-39
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 157 2e-39
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 125 1e-29
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 125 1e-29
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 125 1e-29
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 125 1e-29
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 29 0.87
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z71262-7|CAA95811.2| 368|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z81564-3|CAB04577.1| 536|Caenorhabditis elegans Hypothetical pr... 26 8.1
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 159 bits (385), Expect = 6e-40
Identities = 66/91 (72%), Positives = 78/91 (85%)
Frame = +3
Query: 69 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 248
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1528 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1587
Query: 249 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMM 341
FLFCD N+VCNYASRND+SYWLST + IPMM
Sbjct: 1588 FLFCDFNNVCNYASRNDKSYWLSTSEAIPMM 1618
Score = 52.8 bits (121), Expect = 6e-08
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 54 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 230
CA + + V HSQ +P C G LW GYS ++ + Q L GSC+
Sbjct: 1632 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLE 1690
Query: 231 KFSTMPFLFCD-LNDVCNYASRNDRSYWLST 320
F PF+ C+ C+Y + N S+WL+T
Sbjct: 1691 DFRATPFIECNGARGSCHYFA-NKFSFWLTT 1720
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 159 bits (385), Expect = 6e-40
Identities = 66/91 (72%), Positives = 78/91 (85%)
Frame = +3
Query: 69 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 248
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1529 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1588
Query: 249 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMM 341
FLFCD N+VCNYASRND+SYWLST + IPMM
Sbjct: 1589 FLFCDFNNVCNYASRNDKSYWLSTSEAIPMM 1619
Score = 52.8 bits (121), Expect = 6e-08
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 54 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 230
CA + + V HSQ +P C G LW GYS ++ + Q L GSC+
Sbjct: 1633 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLE 1691
Query: 231 KFSTMPFLFCD-LNDVCNYASRNDRSYWLST 320
F PF+ C+ C+Y + N S+WL+T
Sbjct: 1692 DFRATPFIECNGARGSCHYFA-NKFSFWLTT 1721
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 157 bits (381), Expect = 2e-39
Identities = 65/91 (71%), Positives = 78/91 (85%)
Frame = +3
Query: 69 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 248
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1529 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1588
Query: 249 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMM 341
FLFCD N+VCNYASRN++SYWLST + IPMM
Sbjct: 1589 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMM 1619
Score = 50.0 bits (114), Expect = 4e-07
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 54 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 230
CA + + V HSQ +P C G LW GYS ++ + Q GSC+
Sbjct: 1633 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLE 1691
Query: 231 KFSTMPFLFCD-LNDVCNYASRNDRSYWLST 320
F PF+ C+ C+Y + N S+WL+T
Sbjct: 1692 DFRATPFIECNGARGSCHYFA-NKFSFWLTT 1721
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 157 bits (381), Expect = 2e-39
Identities = 65/91 (71%), Positives = 78/91 (85%)
Frame = +3
Query: 69 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 248
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1528 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1587
Query: 249 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMM 341
FLFCD N+VCNYASRN++SYWLST + IPMM
Sbjct: 1588 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMM 1618
Score = 50.0 bits (114), Expect = 4e-07
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 54 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 230
CA + + V HSQ +P C G LW GYS ++ + Q GSC+
Sbjct: 1632 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLE 1690
Query: 231 KFSTMPFLFCD-LNDVCNYASRNDRSYWLST 320
F PF+ C+ C+Y + N S+WL+T
Sbjct: 1691 DFRATPFIECNGARGSCHYFA-NKFSFWLTT 1720
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 157 bits (381), Expect = 2e-39
Identities = 65/91 (71%), Positives = 78/91 (85%)
Frame = +3
Query: 69 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 248
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1565 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1624
Query: 249 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMM 341
FLFCD N+VCNYASRN++SYWLST + IPMM
Sbjct: 1625 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMM 1655
Score = 50.0 bits (114), Expect = 4e-07
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 54 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 230
CA + + V HSQ +P C G LW GYS ++ + Q GSC+
Sbjct: 1669 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLE 1727
Query: 231 KFSTMPFLFCD-LNDVCNYASRNDRSYWLST 320
F PF+ C+ C+Y + N S+WL+T
Sbjct: 1728 DFRATPFIECNGARGSCHYFA-NKFSFWLTT 1757
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 157 bits (381), Expect = 2e-39
Identities = 65/91 (71%), Positives = 78/91 (85%)
Frame = +3
Query: 69 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 248
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 31 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 90
Query: 249 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMM 341
FLFCD N+VCNYASRN++SYWLST + IPMM
Sbjct: 91 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMM 121
Score = 52.8 bits (121), Expect = 6e-08
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 54 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 230
CA + + V HSQ +P C G LW GYS ++ + Q L GSC+
Sbjct: 135 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLE 193
Query: 231 KFSTMPFLFCD-LNDVCNYASRNDRSYWLST 320
F PF+ C+ C+Y + N S+WL+T
Sbjct: 194 DFRATPFIECNGARGSCHYFA-NKFSFWLTT 223
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 125 bits (301), Expect = 1e-29
Identities = 52/89 (58%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = +3
Query: 78 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 257
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 1278 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 1337
Query: 258 CDLNDVCNYASRNDRSYWLSTGQPI-PMM 341
C++N VC+ +SRND S+WLST +P+ PMM
Sbjct: 1338 CNMNSVCHVSSRNDYSFWLSTDEPMTPMM 1366
Score = 63.3 bits (147), Expect = 4e-11
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 54 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 230
CA + T I+ V HSQ VPQC G +W GYS +++ + Q L GSC+
Sbjct: 1381 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 1439
Query: 231 KFSTMPFLFCDLNDVCNYASRNDRSYWLS 317
+F +PF+ C CNY + N +WLS
Sbjct: 1440 EFRAVPFIECHGRGTCNYYATN-HGFWLS 1467
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 125 bits (301), Expect = 1e-29
Identities = 52/89 (58%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = +3
Query: 78 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 257
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 1535 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 1594
Query: 258 CDLNDVCNYASRNDRSYWLSTGQPI-PMM 341
C++N VC+ +SRND S+WLST +P+ PMM
Sbjct: 1595 CNMNSVCHVSSRNDYSFWLSTDEPMTPMM 1623
Score = 63.3 bits (147), Expect = 4e-11
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 54 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 230
CA + T I+ V HSQ VPQC G +W GYS +++ + Q L GSC+
Sbjct: 1638 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 1696
Query: 231 KFSTMPFLFCDLNDVCNYASRNDRSYWLS 317
+F +PF+ C CNY + N +WLS
Sbjct: 1697 EFRAVPFIECHGRGTCNYYATN-HGFWLS 1724
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 125 bits (301), Expect = 1e-29
Identities = 52/89 (58%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = +3
Query: 78 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 257
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 1534 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 1593
Query: 258 CDLNDVCNYASRNDRSYWLSTGQPI-PMM 341
C++N VC+ +SRND S+WLST +P+ PMM
Sbjct: 1594 CNMNSVCHVSSRNDYSFWLSTDEPMTPMM 1622
Score = 60.5 bits (140), Expect = 3e-10
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +3
Query: 54 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 230
CA + T I+ V HSQ VPQC G +W GYS +++ + Q L GSC+
Sbjct: 1637 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 1695
Query: 231 KFSTMPFLFCDLNDVCNYASRNDRSYWLS 317
+F +PF+ C CNY + N +W S
Sbjct: 1696 EFRAVPFIECHGRGTCNYYATN-HGFWPS 1723
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 125 bits (301), Expect = 1e-29
Identities = 52/89 (58%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = +3
Query: 78 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 257
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 89 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 148
Query: 258 CDLNDVCNYASRNDRSYWLSTGQPI-PMM 341
C++N VC+ +SRND S+WLST +P+ PMM
Sbjct: 149 CNMNSVCHVSSRNDYSFWLSTDEPMTPMM 177
Score = 60.5 bits (140), Expect = 3e-10
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +3
Query: 54 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 230
CA + T I+ V HSQ VPQC G +W GYS +++ + Q L GSC+
Sbjct: 192 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 250
Query: 231 KFSTMPFLFCDLNDVCNYASRNDRSYWLS 317
+F +PF+ C CNY + N +W S
Sbjct: 251 EFRAVPFIECHGRGTCNYYATN-HGFWPS 278
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 29.1 bits (62), Expect = 0.87
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 105 REVVPQCEPGHVKLWDGYSLLYIDGNEKAHN 197
R V + GHVK+WDG S ++ ++AH+
Sbjct: 272 RLYVTASKDGHVKIWDGVSNRCVETFKRAHD 302
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 195 NQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQ 326
NQD+G+ CV KF T +++ C + Y ++ GQ
Sbjct: 61 NQDVGFQSKCVGKFDTGSMATMNMDVACAF-DEISAKYVIAAGQ 103
>Z71262-7|CAA95811.2| 368|Caenorhabditis elegans Hypothetical
protein F22D6.9 protein.
Length = 368
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 108 EVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFS 239
EVV H++ D +LL + + N+ G+ G CVR++S
Sbjct: 154 EVVLMLFAMHLRWPDRVTLLRGNHESRPVNRQYGFYGECVRRYS 197
>Z81564-3|CAB04577.1| 536|Caenorhabditis elegans Hypothetical
protein K05C4.3 protein.
Length = 536
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 183 EKAHNQDLGYAGSCVRKFST--MPFLFCDLNDVCNYASRNDRSYWLSTGQ 326
+K N D+ Y K++T + L+ L + NY+ + D+S+W S +
Sbjct: 378 DKFINVDVQYLKQIFNKWNTDRLYILYSILAILLNYSDQVDQSFWKSVNE 427
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,772,393
Number of Sequences: 27780
Number of extensions: 155689
Number of successful extensions: 385
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -