Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I23
         (342 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   0.44 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   4.1  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    20   7.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    20   7.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    20   7.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    20   7.2  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    20   7.2  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 0.44
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 250 NGIVLNFRTHEPAYPRSWLCAFSFPSIYN 164
           NG +L+   H+      W+C   +  IYN
Sbjct: 361 NGNILSPSIHDNICSNGWICEHRWRQIYN 389


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 262 SQKRNGIVLNFRTHEPAYPRSWLCAFSFPS 173
           SQ + G+    R+ EP Y       FSFP+
Sbjct: 594 SQIQRGVNAAIRSQEPFYITEPHQIFSFPA 623


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +2

Query: 14  YWKKWPTWPTRCTMRHYRLLNWYIIS 91
           +W +W   P R  +    +LN++  S
Sbjct: 322 FWLEWNAVPARVMIGVTTMLNFFTTS 347


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +2

Query: 14  YWKKWPTWPTRCTMRHYRLLNWYIIS 91
           +W +W   P R  +    +LN++  S
Sbjct: 291 FWLEWNAVPARVMIGVTTMLNFFTTS 316


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +2

Query: 14  YWKKWPTWPTRCTMRHYRLLNWYIIS 91
           +W +W   P R  +    +LN++  S
Sbjct: 342 FWLEWNAVPARVMIGVTTMLNFFTTS 367


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +2

Query: 14  YWKKWPTWPTRCTMRHYRLLNWYIIS 91
           +W +W   P R  +    +LN++  S
Sbjct: 291 FWLEWNAVPARVMIGVTTMLNFFTTS 316


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 134 SWFTLRYNFP 105
           SW  + YNFP
Sbjct: 23  SWNVIEYNFP 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,258
Number of Sequences: 438
Number of extensions: 2425
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)