Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I22
(484 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 30 1.0
U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL021473-1|CAA16305.1| 570|Caenorhabditis elegans Hypothetical ... 29 2.3
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z74039-2|CAA98501.1| 448|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 28 4.1
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 28 4.1
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 28 4.1
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 27 5.4
AF026211-2|AAB71294.1| 440|Caenorhabditis elegans Hypothetical ... 27 7.1
U61953-17|AAK82912.1| 278|Caenorhabditis elegans Hypothetical p... 27 9.4
U43283-4|AAU05548.1| 311|Caenorhabditis elegans Dehydrogenases,... 27 9.4
AF292053-1|AAG41149.1| 278|Caenorhabditis elegans 4F223 protein. 27 9.4
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 270 RPSKWACYRVVRSSFTQMRCKWNRPLKFSAYCTSPRTKNYFIKT 401
RP Y ++ + T M KW P+ F P NYF K+
Sbjct: 277 RPDYGKIYEILAAKMTSMGVKWTDPMDFDLQADKP---NYFSKS 317
>U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical
protein B0222.1 protein.
Length = 285
Score = 28.7 bits (61), Expect = 2.3
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -2
Query: 297 RGSMPILKVSMNFVTTSDFEYLSVFSSSIYSLATSLMSSYTVGCST*FKSFMMQISFIFT 118
RGS S +F ++S S FSSS S TS SSY G +T + S Q F T
Sbjct: 29 RGSSGARSSSSSFSSSSSRSSGSSFSSSSSSRPTSGTSSYRSG-NTQYSSNFRQNVFHTT 87
Query: 117 SAFMRLSF-PIT 85
S S+ P+T
Sbjct: 88 STTTMFSYSPLT 99
>AL021473-1|CAA16305.1| 570|Caenorhabditis elegans Hypothetical
protein Y20C6A.2 protein.
Length = 570
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Frame = -2
Query: 351 TSTACS----ICNAFV*TKTSPRGSMPILKV--SMNFVTTSDFEYLSVF 223
T TAC +C F K++ + ++ L V S NFV++ DFE L++F
Sbjct: 437 TQTACEFQNFVCQKFTDLKSAKKCTLNDLLVMESQNFVSSIDFEELNLF 485
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical protein
K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 264 SWRPSKWACYRVVRSSFTQMRCKWNRPLKFSAYCTSPRTKN 386
+W K C + + + + C W PL+ C S + KN
Sbjct: 1176 NWLSLKTICIQKIVNDNSDTPCSWIEPLEIDEICQSKQWKN 1216
>Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical
protein F52H3.3 protein.
Length = 387
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 245 ISSTCPCFPPAYIPSRLP*CPRTQLA 168
+S +CPC P+ IP+RL P TQ A
Sbjct: 26 LSISCPCDNPSNIPNRLFASPPTQSA 51
>Z74039-2|CAA98501.1| 448|Caenorhabditis elegans Hypothetical
protein K03B8.2 protein.
Length = 448
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 14 LILVAFLAAATASVVNDANYSFDVVIGKDSLMKADVKMKEICIMKLLN 157
L+L FLA S + FD GKD ++ D+ + E +++LN
Sbjct: 27 LLLTLFLALVAGSAIRKDVDEFDSNKGKDGIVDGDIMLTE-AQLRILN 73
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 165 CSQLCTRTSRKSRGNICWRKTRTSTRNPMLLRNSWR 272
C+ +C T+ +R +CW K + RN + W+
Sbjct: 377 CTTMCEETNVLTRAEVCWDKFDMNYRN-QCMNGQWQ 411
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 165 CSQLCTRTSRKSRGNICWRKTRTSTRNPMLLRNSWR 272
C+ +C T+ +R +CW K + RN + W+
Sbjct: 377 CTTMCEETNVLTRAEVCWDKFDMNYRN-QCMNGQWQ 411
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 165 CSQLCTRTSRKSRGNICWRKTRTSTRNPMLLRNSWR 272
C+ +C T+ +R +CW K + RN + W+
Sbjct: 377 CTTMCEETNVLTRAEVCWDKFDMNYRN-QCMNGQWQ 411
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical protein
T28F3.5 protein.
Length = 1679
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 116 DVKMKEICIMKLLNYVLQPTVYEDIKEVAREYMLEENTDKYSKSDV 253
DV + L+ +V + Y +K VA + N+D Y SD+
Sbjct: 925 DVSISNCIDQALIEFVNYSSEYSKLKFVANRIKIANNSDNYIVSDI 970
>AF026211-2|AAB71294.1| 440|Caenorhabditis elegans Hypothetical
protein T13B5.3 protein.
Length = 440
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +3
Query: 327 CKWNRPLKFSAYCTSPRTKNYFIKTACWLRERINGGMFVYALTAAV 464
C W LK+ AY T F+ T I GGM Y + AV
Sbjct: 315 CSWIGKLKYHAYSAHDTTVYAFLTTFGDEERVIEGGMPHYTASVAV 360
>U61953-17|AAK82912.1| 278|Caenorhabditis elegans Hypothetical
protein R08C7.12 protein.
Length = 278
Score = 26.6 bits (56), Expect = 9.4
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -3
Query: 458 SSESIYEHAPVNAFP*PASSFDEVVLSPWRSTVCGKLQRPVPFATHLCERRPHHA 294
SS S +P+ F P+SSF + S LQ P P T PH+A
Sbjct: 7 SSSSRMLPSPITNFVTPSSSFSSHQMHDIYSLAASYLQAPPPPYTPTTAFHPHNA 61
>U43283-4|AAU05548.1| 311|Caenorhabditis elegans Dehydrogenases,
short chain protein30 protein.
Length = 311
Score = 26.6 bits (56), Expect = 9.4
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +2
Query: 83 VVIGKDSLMKADVKMKEICIMKLLNYVLQPTVYEDIKEVAREYMLEENTDKYSKSDVVTK 262
++ G +L K DVK K + I + + + +E K A+ +L +T+K ++ +
Sbjct: 33 IIPGAHNLPKLDVKNKVVVITGASSGLGKSLAFELYKRGAQVILLARSTEKL--KEICEE 90
Query: 263 FMETFKMGMLPRGEVFVHTNALQMEQA 343
ETF + ++ + + EQA
Sbjct: 91 LKETFPLNQ--NEPIYYYFDITDSEQA 115
>AF292053-1|AAG41149.1| 278|Caenorhabditis elegans 4F223 protein.
Length = 278
Score = 26.6 bits (56), Expect = 9.4
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -3
Query: 458 SSESIYEHAPVNAFP*PASSFDEVVLSPWRSTVCGKLQRPVPFATHLCERRPHHA 294
SS S +P+ F P+SSF + S LQ P P T PH+A
Sbjct: 7 SSSSRMLPSPITNFVTPSSSFSSHQMHDIYSLAASYLQAPPPPYTPTTAFHPHNA 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,673,482
Number of Sequences: 27780
Number of extensions: 227671
Number of successful extensions: 665
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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