Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I21
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +1

Query: 178 IVGESFDLMDGIFGMTLSPYRAGIDRSLYFHALASTTENVVRT 306
           I+GE+ DL + +FG         I   L  H + +  +  + T
Sbjct: 359 ILGETVDLFNSLFGYQTLLITFHIGSQLVLHTVKTVLKTTMST 401


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/64 (20%), Positives = 26/64 (40%)
 Frame = +1

Query: 391 QSAAEAMDCNGRMFFGLMDPPSMWSWNSNTEYSPENFHAVAIDKQTLQFASGVKIVNNLR 570
           Q +  A++C    F     P  + +W   T  SP ++     +   ++   G   +NN++
Sbjct: 712 QGSDAAVECKADGF-----PRPVVTWKRATGVSPGDYKDFKPNNPDIKVEDGTLTINNIQ 766

Query: 571 GEQE 582
              E
Sbjct: 767 KTNE 770



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 469  NSNTEYSPENFHAVAIDKQTLQFASGVKIVNNLRGE 576
            N   EY    +  V+ D +T    +  KIV NLR +
Sbjct: 1228 NGIVEYYTVYYKPVSTDDKTEVKPTSQKIVPNLRNQ 1263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,594
Number of Sequences: 336
Number of extensions: 3430
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)