Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I21
         (586 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X68194-1|CAA48276.1|  259|Homo sapiens h-Sp1 protein.                  30   5.2  
S72481-1|AAB31344.1|  259|Homo sapiens pantophysin protein.            30   5.2  
BC061887-1|AAH61887.1|  259|Homo sapiens synaptophysin-like 1 pr...    30   5.2  
BC020938-1|AAH20938.1|  241|Homo sapiens synaptophysin-like 1 pr...    30   5.2  
BC016835-1|AAH16835.3|  241|Homo sapiens synaptophysin-like 1 pr...    30   5.2  
AC005095-1|AAD50513.1|  259|Homo sapiens pantophysin protein.          30   5.2  

>X68194-1|CAA48276.1|  259|Homo sapiens h-Sp1 protein.
          Length = 259

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -3

Query: 362 TSLELSSEFSMYVRFLNTLVRTTFSVVDASAWK*RERSIPAR*GDRVIPKMPSIRSK 192
           TSL L S     + F+ TLV T   +V  SAW      I    G  +I ++P  + K
Sbjct: 140 TSLYLDSRKLPMIDFVVTLVATFLWLVSTSAWAKALTDIKIATGHNIIDELPPCKKK 196


>S72481-1|AAB31344.1|  259|Homo sapiens pantophysin protein.
          Length = 259

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -3

Query: 362 TSLELSSEFSMYVRFLNTLVRTTFSVVDASAWK*RERSIPAR*GDRVIPKMPSIRSK 192
           TSL L S     + F+ TLV T   +V  SAW      I    G  +I ++P  + K
Sbjct: 140 TSLYLDSRKLPMIDFVVTLVATFLWLVSTSAWAKALTDIKIATGHNIIDELPPCKKK 196


>BC061887-1|AAH61887.1|  259|Homo sapiens synaptophysin-like 1
           protein.
          Length = 259

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -3

Query: 362 TSLELSSEFSMYVRFLNTLVRTTFSVVDASAWK*RERSIPAR*GDRVIPKMPSIRSK 192
           TSL L S     + F+ TLV T   +V  SAW      I    G  +I ++P  + K
Sbjct: 140 TSLYLDSRKLPMIDFVVTLVATFLWLVSTSAWAKALTDIKIATGHNIIDELPPCKKK 196


>BC020938-1|AAH20938.1|  241|Homo sapiens synaptophysin-like 1
           protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -3

Query: 362 TSLELSSEFSMYVRFLNTLVRTTFSVVDASAWK*RERSIPAR*GDRVIPKMPSIRSK 192
           TSL L S     + F+ TLV T   +V  SAW      I    G  +I ++P  + K
Sbjct: 122 TSLYLDSRKLPMIDFVVTLVATFLWLVSTSAWAKALTDIKIATGHNIIDELPPCKKK 178


>BC016835-1|AAH16835.3|  241|Homo sapiens synaptophysin-like 1
           protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -3

Query: 362 TSLELSSEFSMYVRFLNTLVRTTFSVVDASAWK*RERSIPAR*GDRVIPKMPSIRSK 192
           TSL L S     + F+ TLV T   +V  SAW      I    G  +I ++P  + K
Sbjct: 122 TSLYLDSRKLPMIDFVVTLVATFLWLVSTSAWAKALTDIKIATGHNIIDELPPCKKK 178


>AC005095-1|AAD50513.1|  259|Homo sapiens pantophysin protein.
          Length = 259

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -3

Query: 362 TSLELSSEFSMYVRFLNTLVRTTFSVVDASAWK*RERSIPAR*GDRVIPKMPSIRSK 192
           TSL L S     + F+ TLV T   +V  SAW      I    G  +I ++P  + K
Sbjct: 140 TSLYLDSRKLPMIDFVVTLVATFLWLVSTSAWAKALTDIKIATGHNIIDELPPCKKK 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,273,605
Number of Sequences: 237096
Number of extensions: 1816764
Number of successful extensions: 3552
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3552
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)