Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I20
         (541 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058716-1|AAL13945.1|  458|Drosophila melanogaster LD45603p pro...    28   9.4  
AE014296-2191|AAF49880.3|  458|Drosophila melanogaster CG17667-P...    28   9.4  
AE014296-2190|AAF49879.3|  458|Drosophila melanogaster CG17667-P...    28   9.4  

>AY058716-1|AAL13945.1|  458|Drosophila melanogaster LD45603p
           protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = +1

Query: 61  MVVGYKWYYLIPVSISIDIRFENFSPSGYSRVIPIYPFNRKTSTF*QRSLPKDPPAT 231
           M V YK+  L+   +S+ I   N +P+G     P+  FN     + + +  ++ P T
Sbjct: 1   MHVYYKFGLLLIFLLSVSISHTNAAPAGSEEANPLEDFNYGDDDYSETATGEESPET 57


>AE014296-2191|AAF49880.3|  458|Drosophila melanogaster CG17667-PB,
           isoform B protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = +1

Query: 61  MVVGYKWYYLIPVSISIDIRFENFSPSGYSRVIPIYPFNRKTSTF*QRSLPKDPPAT 231
           M V YK+  L+   +S+ I   N +P+G     P+  FN     + + +  ++ P T
Sbjct: 1   MHVYYKFGLLLIFLLSVSISHTNAAPAGSEEANPLEDFNYGDDDYSETATGEESPET 57


>AE014296-2190|AAF49879.3|  458|Drosophila melanogaster CG17667-PA,
           isoform A protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = +1

Query: 61  MVVGYKWYYLIPVSISIDIRFENFSPSGYSRVIPIYPFNRKTSTF*QRSLPKDPPAT 231
           M V YK+  L+   +S+ I   N +P+G     P+  FN     + + +  ++ P T
Sbjct: 1   MHVYYKFGLLLIFLLSVSISHTNAAPAGSEEANPLEDFNYGDDDYSETATGEESPET 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,864,534
Number of Sequences: 53049
Number of extensions: 521004
Number of successful extensions: 1086
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)