Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I19
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical p... 29 2.3
AC024791-12|AAT81181.1| 401|Caenorhabditis elegans Hypothetical... 29 2.3
AC024791-11|AAF60659.1| 410|Caenorhabditis elegans Hypothetical... 29 2.3
Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical pr... 28 5.4
U41272-6|AAA82450.2| 331|Caenorhabditis elegans Serpentine rece... 27 7.1
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 27 9.4
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 27 9.4
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 27 9.4
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 27 9.4
U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical pr... 27 9.4
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 27 9.4
AF016657-5|AAB93661.3| 278|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical
protein T26E4.15 protein.
Length = 302
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +2
Query: 452 NVFNIKICIHCNSVN*YCSLMVKKLYSILLFCDIILYT 565
N+F + + +H N + C++++ + FCD++L+T
Sbjct: 23 NLFMVLVTLHSNKLRSICNILI----CVCCFCDLLLFT 56
>AC024791-12|AAT81181.1| 401|Caenorhabditis elegans Hypothetical
protein Y47G6A.7b protein.
Length = 401
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 151 WRISLQSEAGLTSLKLFLESWKYEIMLLAGI 59
WR SL E GL + LFL +WK + L G+
Sbjct: 198 WRNSLGFETGLIAAGLFLFTWKSSQLDLTGL 228
>AC024791-11|AAF60659.1| 410|Caenorhabditis elegans Hypothetical
protein Y47G6A.7a protein.
Length = 410
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 151 WRISLQSEAGLTSLKLFLESWKYEIMLLAGI 59
WR SL E GL + LFL +WK + L G+
Sbjct: 198 WRNSLGFETGLIAAGLFLFTWKSSQLDLTGL 228
>Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical
protein ZK829.10 protein.
Length = 669
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 331 IIHKASVYERMILPYGVLLAHGQAQAILLQ 420
I+ + SVY+ +LP G+LL H +L Q
Sbjct: 329 ILGRKSVYDLTVLPNGLLLTHSTFPVLLRQ 358
>U41272-6|AAA82450.2| 331|Caenorhabditis elegans Serpentine
receptor, class u protein48 protein.
Length = 331
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 272 TWCLYHLAICVVLNIVCCFRSMI 204
+WC+ L+ CV L ++C R I
Sbjct: 28 SWCVLGLSACVFLGLICFIRMAI 50
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 129 SLCNEIRQPV-GQCQNIHISTNCYYGYHG 212
SLC+E V G+ H NC+YGYHG
Sbjct: 1247 SLCDENADCVPGEAG--HYVCNCHYGYHG 1273
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 27.1 bits (57), Expect = 9.4
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Frame = +3
Query: 114 DVKPASLCNEIRQPVGQCQN--IHISTNCYYGYHGP---KTANNIQHNTDCEMVEAPCTN 278
D+K +Q G+ N IS+N Y G G + N NT+ + P TN
Sbjct: 196 DIKFDEKARSFKQRTGEDYNGGFDISSN-YQGSEGSGGYQHIGNTWPNTESQWNYDPSTN 254
Query: 279 GSGTLQAGSRKRSA-----DNSDYPQSKRIREDDSSIWSLVGTRSSPSHSASA 422
G T A + S S+Y R E SS + G + P+ ++++
Sbjct: 255 GYSTFLASTPDTSTTYQPYQPSEYANFSRQLESSSSSVPVYGGATDPTQTSTS 307
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 27.1 bits (57), Expect = 9.4
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Frame = +3
Query: 114 DVKPASLCNEIRQPVGQCQN--IHISTNCYYGYHGP---KTANNIQHNTDCEMVEAPCTN 278
D+K +Q G+ N IS+N Y G G + N NT+ + P TN
Sbjct: 196 DIKFDEKARSFKQRTGEDYNGGFDISSN-YQGSEGSGGYQHIGNTWPNTESQWNYDPSTN 254
Query: 279 GSGTLQAGSRKRSA-----DNSDYPQSKRIREDDSSIWSLVGTRSSPSHSASA 422
G T A + S S+Y R E SS + G + P+ ++++
Sbjct: 255 GYSTFLASTPDTSTTYQPYQPSEYANFSRQLESSSSSVPVYGGATDPTQTSTS 307
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 27.1 bits (57), Expect = 9.4
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Frame = +3
Query: 114 DVKPASLCNEIRQPVGQCQN--IHISTNCYYGYHGP---KTANNIQHNTDCEMVEAPCTN 278
D+K +Q G+ N IS+N Y G G + N NT+ + P TN
Sbjct: 196 DIKFDEKARSFKQRTGEDYNGGFDISSN-YQGSEGSGGYQHIGNTWPNTESQWNYDPSTN 254
Query: 279 GSGTLQAGSRKRSA-----DNSDYPQSKRIREDDSSIWSLVGTRSSPSHSASA 422
G T A + S S+Y R E SS + G + P+ ++++
Sbjct: 255 GYSTFLASTPDTSTTYQPYQPSEYANFSRQLESSSSSVPVYGGATDPTQTSTS 307
>U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical
protein T22F7.3 protein.
Length = 988
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +3
Query: 204 YHGPKTANNIQHNTDCEMV--EAPCTNGSGTLQAGSRKRSADNSDYPQS 344
YHG NN DCE + C NG+ +R N+D P S
Sbjct: 381 YHGLGNYNNFLTKQDCESFCSKLVCENGNPLRIGEEWQRCETNADCPSS 429
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 108 FNDVKPASLCNEIRQPVG--QCQNIHISTNCYYGYHGPKTANNIQHNTDCEM 257
+N V S C +Q +G QCQN +I CY GY I + +C++
Sbjct: 172 YNSVNIGSACQSTQQCLGGSQCQN-NI-CQCYSGYVNVNQQCVISNGLNCQL 221
>AF016657-5|AAB93661.3| 278|Caenorhabditis elegans Hypothetical
protein C16C4.4 protein.
Length = 278
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 252 EMVEAPCTNGSGTLQAGSRKRSADNSDYPQSKRIREDDSS 371
+M E NGS ++A + S + SD S EDDSS
Sbjct: 205 DMEEKYMVNGSIIIEARGKITSLEESDDESSSENEEDDSS 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,077,295
Number of Sequences: 27780
Number of extensions: 293255
Number of successful extensions: 867
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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