Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I19
         (567 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              24   1.2  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    22   4.9  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   4.9  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   4.9  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   8.6  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   8.6  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   8.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.6  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 141 EIRQPVGQCQNIHISTNCYYGY 206
           E+++ + +C+ I    NC Y Y
Sbjct: 107 EVQKAISECKGIAKGDNCEYAY 128


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 409 WLGLDRVPTRL 377
           WLGLD +P R+
Sbjct: 222 WLGLDAIPGRV 232


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 404 KPFCFSL*CKHTKILHNVFNIKICIHCNSVN*YCSLMVKK 523
           +P C        KI+  V+N  + +   +V  Y   M+KK
Sbjct: 30  QPICVGETGTSQKIIDEVYNGNVNVEDENVQSYVECMMKK 69


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 359 LSYTLALWIIAVISA 315
           + + LA W+IA+ISA
Sbjct: 159 IRFILAAWLIALISA 173


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +3

Query: 105 NFNDVKPASLCNEIRQPVGQCQNIHISTNCYYGYHGPK 218
           N+N+    + C ++   +   + I I    YYG   P+
Sbjct: 99  NYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPR 136


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +3

Query: 105 NFNDVKPASLCNEIRQPVGQCQNIHISTNCYYGYHGPK 218
           N+N+    + C ++   +   + I I    YYG   P+
Sbjct: 99  NYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPR 136


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +3

Query: 105 NFNDVKPASLCNEIRQPVGQCQNIHISTNCYYGYHGPK 218
           N+N+    + C ++   +   + I I    YYG   P+
Sbjct: 99  NYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPR 136


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 310 FREPACNVPEPLVHGASTISQSVLC 236
           F  PAC    PL +      Q +LC
Sbjct: 43  FTSPACGSETPLTNIEEKTYQCLLC 67


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +1

Query: 157 WVNARTYIYQQIVTTDIMDLKQQTIFNTTQIAR 255
           +VN + ++  +    ++     Q IFNT  IA+
Sbjct: 278 YVNTKPFMKSEYGANNVQYQGVQDIFNTESIAK 310


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,362
Number of Sequences: 438
Number of extensions: 3372
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)