Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I18
         (384 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029067-1|AAH29067.1|   65|Homo sapiens chromosome 13 open read...    97   2e-20
AL138960-2|CAI12995.1|   65|Homo sapiens RP11-269C23.1 protein.        97   2e-20
CR533472-1|CAG38503.1|   66|Homo sapiens SERP1 protein.                86   3e-17
BC112365-1|AAI12366.1|   66|Homo sapiens stress-associated endop...    86   3e-17
BC112364-1|AAI12365.1|   66|Homo sapiens stress-associated endop...    86   3e-17
BC108314-1|AAI08315.1|   66|Homo sapiens stress-associated endop...    86   3e-17
AF136975-1|AAG49436.1|   66|Homo sapiens ribosome attached membr...    86   3e-17
AB022427-1|BAA81895.1|   66|Homo sapiens SERP1 protein.                86   3e-17

>BC029067-1|AAH29067.1|   65|Homo sapiens chromosome 13 open reading
           frame 21 protein.
          Length = 65

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 44/60 (73%), Positives = 53/60 (88%)
 Frame = +3

Query: 9   KQRMRIANEIASKNITLRGNVPKSTKEKEDQYPVAPWLLALFIFVVCGSAIFQIIQSIRL 188
           KQR+R+ANE  SKNIT RGNV K+ + +E++YPV PWLLALF+FVVCGSAIFQIIQSIR+
Sbjct: 4   KQRIRMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRM 63


>AL138960-2|CAI12995.1|   65|Homo sapiens RP11-269C23.1 protein.
          Length = 65

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 44/60 (73%), Positives = 53/60 (88%)
 Frame = +3

Query: 9   KQRMRIANEIASKNITLRGNVPKSTKEKEDQYPVAPWLLALFIFVVCGSAIFQIIQSIRL 188
           KQR+R+ANE  SKNIT RGNV K+ + +E++YPV PWLLALF+FVVCGSAIFQIIQSIR+
Sbjct: 4   KQRIRMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRM 63


>CR533472-1|CAG38503.1|   66|Homo sapiens SERP1 protein.
          Length = 66

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
 Frame = +3

Query: 9   KQRMRIANEIASKNITLRGNVPKSTKEK-EDQYPVAPWLLALFIFVVCGSAIFQIIQSIR 185
           KQR+R+ANE  SKNIT RGNV K+++   E++  V PWLLALFIFVVCGSAIFQIIQSIR
Sbjct: 4   KQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIR 63

Query: 186 L 188
           +
Sbjct: 64  M 64


>BC112365-1|AAI12366.1|   66|Homo sapiens stress-associated
           endoplasmic reticulum protein 1 protein.
          Length = 66

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
 Frame = +3

Query: 9   KQRMRIANEIASKNITLRGNVPKSTKEK-EDQYPVAPWLLALFIFVVCGSAIFQIIQSIR 185
           KQR+R+ANE  SKNIT RGNV K+++   E++  V PWLLALFIFVVCGSAIFQIIQSIR
Sbjct: 4   KQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIR 63

Query: 186 L 188
           +
Sbjct: 64  M 64


>BC112364-1|AAI12365.1|   66|Homo sapiens stress-associated
           endoplasmic reticulum protein 1 protein.
          Length = 66

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
 Frame = +3

Query: 9   KQRMRIANEIASKNITLRGNVPKSTKEK-EDQYPVAPWLLALFIFVVCGSAIFQIIQSIR 185
           KQR+R+ANE  SKNIT RGNV K+++   E++  V PWLLALFIFVVCGSAIFQIIQSIR
Sbjct: 4   KQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIR 63

Query: 186 L 188
           +
Sbjct: 64  M 64


>BC108314-1|AAI08315.1|   66|Homo sapiens stress-associated
           endoplasmic reticulum protein 1 protein.
          Length = 66

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
 Frame = +3

Query: 9   KQRMRIANEIASKNITLRGNVPKSTKEK-EDQYPVAPWLLALFIFVVCGSAIFQIIQSIR 185
           KQR+R+ANE  SKNIT RGNV K+++   E++  V PWLLALFIFVVCGSAIFQIIQSIR
Sbjct: 4   KQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIR 63

Query: 186 L 188
           +
Sbjct: 64  M 64


>AF136975-1|AAG49436.1|   66|Homo sapiens ribosome attached membrane
           protein 4 protein.
          Length = 66

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
 Frame = +3

Query: 9   KQRMRIANEIASKNITLRGNVPKSTKEK-EDQYPVAPWLLALFIFVVCGSAIFQIIQSIR 185
           KQR+R+ANE  SKNIT RGNV K+++   E++  V PWLLALFIFVVCGSAIFQIIQSIR
Sbjct: 4   KQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIR 63

Query: 186 L 188
           +
Sbjct: 64  M 64


>AB022427-1|BAA81895.1|   66|Homo sapiens SERP1 protein.
          Length = 66

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
 Frame = +3

Query: 9   KQRMRIANEIASKNITLRGNVPKSTKEK-EDQYPVAPWLLALFIFVVCGSAIFQIIQSIR 185
           KQR+R+ANE  SKNIT RGNV K+++   E++  V PWLLALFIFVVCGSAIFQIIQSIR
Sbjct: 4   KQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIR 63

Query: 186 L 188
           +
Sbjct: 64  M 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,930,631
Number of Sequences: 237096
Number of extensions: 968514
Number of successful extensions: 1842
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1836
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)