Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I16
         (524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    29   0.13 
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    27   0.39 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   6.3  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 3   EKRYSCDICQKRFYDRTKLNRH 68
           EK YSCD+C  RF     L  H
Sbjct: 265 EKPYSCDVCFARFTQSNSLKAH 286



 Score = 26.6 bits (56), Expect = 0.51
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 3   EKRYSCDICQKRFYDRTKLNRHIDSHND 86
           +K Y CD C + F  +  L RH++ +++
Sbjct: 380 QKPYKCDQCAQTFRQKQLLKRHMNYYHN 407



 Score = 25.4 bits (53), Expect = 1.2
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +3

Query: 3   EKRYSCDICQKRFYDRTKLNRHIDSHNDIK 92
           ++ + C +C++ F     L  H+++H   K
Sbjct: 152 DRPHKCVVCERGFKTLASLQNHVNTHTGTK 181



 Score = 24.2 bits (50), Expect = 2.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 3   EKRYSCDICQKRFYDRTKLNRHIDSHNDIK 92
           EK + C  C     D+ KL RH+  H   K
Sbjct: 237 EKPFQCPHCTYASPDKFKLTRHMRIHTGEK 266


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 27.1 bits (57), Expect = 0.39
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 199 IPLNVIHHLRVTFTLIPSRDFQSPSIFSVIFLFP 98
           IP+  +HH    F  +  R +  PS  +V+ L P
Sbjct: 53  IPMGAVHHKNRVFVAVARRRWGIPSTLNVVDLSP 86


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +3

Query: 324  HIEVFVYDFTYTNKSNFSVRL*YQSDNFLNFLT 422
            + + + ++F Y + SN++  L YQ  ++  + T
Sbjct: 1546 YFDQYSFNFEYKDVSNYAKNLTYQFFDYARYFT 1578


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,233
Number of Sequences: 2352
Number of extensions: 9270
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)