Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I15
(376 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 2.7
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 3.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 3.6
AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. 21 3.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 3.6
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 4.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 4.8
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 4.8
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 6.3
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 20 8.3
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 20 8.3
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 20 8.3
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 2.7
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = -1
Query: 307 TLGLLSFLGHHSILEHQGHHLTLEDHLFQEHRVVLVLLFDHKRLLQVHL 161
T+G + + H + L E+ LF V L FD++ Q L
Sbjct: 144 TMGQIREVARHFYHKELQIELVREEILFDTVHVTFKLTFDNRAFTQASL 192
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 3.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 202 PGPRGVPGIDG 234
PGP GVPG G
Sbjct: 332 PGPPGVPGDHG 342
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 3.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 202 PGPRGVPGIDG 234
PGP GVPG G
Sbjct: 332 PGPPGVPGDHG 342
>AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein.
Length = 50
Score = 21.4 bits (43), Expect = 3.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 190 DHKRLLQVHLYHLCSLV 140
DH + +YHLC++V
Sbjct: 33 DHNGSIYWSMYHLCTVV 49
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 3.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 202 PGPRGVPGIDG 234
PGP GVPG G
Sbjct: 271 PGPPGVPGDHG 281
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 4.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 61 PGGQGAIGMSGEKGDRGFPGRS 126
P G SGE RG G+S
Sbjct: 380 PSGSSVHSDSGENNSRGHSGQS 401
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 4.8
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -1
Query: 280 HHSILEHQGHHLTLEDHLFQEHRVVLVLLFDHKRLLQVHLYHLCSLVHQLN 128
+ + L+H TL+D + RV + ++ + LQ L +++H L+
Sbjct: 295 YQAFLKHLNTEHTLDDRSTAQARVRMQVVSQLEIQLQKERDRLTAMMHHLH 345
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.0 bits (42), Expect = 4.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 233 PSIPGTPRGPG 201
P P PRGPG
Sbjct: 393 PCTPSPPRGPG 403
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 20.6 bits (41), Expect = 6.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 22 QKGDRGERGLDGRPGGQGAIGMSGEKGDRGFPG 120
+K D E G G+ G G G G G+RG G
Sbjct: 71 KKTDIEETGR-GKGRGHGKGGSRGRGGNRGRTG 102
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 8.3
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = +3
Query: 114 SWKKWFNW 137
SW KW +W
Sbjct: 695 SWNKWNDW 702
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 8.3
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = +3
Query: 114 SWKKWFNW 137
SW KW +W
Sbjct: 695 SWNKWNDW 702
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 8.3
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = +3
Query: 114 SWKKWFNW 137
SW KW +W
Sbjct: 695 SWNKWNDW 702
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.310 0.147 0.453
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,426
Number of Sequences: 438
Number of extensions: 2037
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9052365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.2 bits)
- SilkBase 1999-2023 -