Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I14
(491 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 0.42
At4g38340.1 68417.m05420 RWP-RK domain-containing protein simila... 30 0.74
At2g33780.1 68415.m04143 VQ motif-containing protein contains PF... 29 2.2
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 29 2.2
At5g59700.1 68418.m07484 protein kinase, putative similar to rec... 28 3.0
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 3.0
At1g05370.1 68414.m00544 expressed protein 28 3.0
At4g08370.1 68417.m01382 proline-rich extensin-like family prote... 27 5.2
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 27 5.2
At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein... 27 6.9
At3g09780.1 68416.m01161 protein kinase family protein contains ... 27 6.9
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 27 6.9
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 27 6.9
At2g01570.1 68415.m00081 gibberellin response modulator (RGA1) /... 27 6.9
At5g35190.1 68418.m04170 proline-rich extensin-like family prote... 27 9.1
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 27 9.1
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 27 9.1
At2g47240.1 68415.m05899 long-chain-fatty-acid--CoA ligase famil... 27 9.1
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.1 bits (67), Expect = 0.42
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 307 PTSYMRGPPESPLHASSPGLPPAHSC 230
P + PP SP+H SSP PP+ C
Sbjct: 675 PEVHYHSPPPSPVHYSSPPPPPSAPC 700
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 307 PTSYMRGPPESPLHASSPGLPPAH 236
P Y PP P+H SSP P H
Sbjct: 655 PVYYSSPPPPPPVHYSSPPPPEVH 678
>At4g38340.1 68417.m05420 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 767
Score = 30.3 bits (65), Expect = 0.74
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -2
Query: 295 MRGPPESPLHASSPGLPPAHSCSL--VI--TSASPPRNVLCAA*HLSLSTYGSLTCCL 134
M GP + LHA + PP+ S SL V+ +S R +L HLSLS + + + CL
Sbjct: 1 MVGPFKKILHAHNQRFPPSSSSSLDPVVDDSSRKQTRIILSYLLHLSLSLHITYSLCL 58
>At2g33780.1 68415.m04143 VQ motif-containing protein contains
PF05678: VQ motif
Length = 204
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 334 TDPTITKVLPTSYMRGPPESPLHASSPGLPPAHS 233
TDP+ K + + G P++P H P PP HS
Sbjct: 41 TDPSSFKQV-VQLLTGIPKNPTHQPDPRFPPFHS 73
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 328 PTITKVLPTSYMRGP--PESPLHASSPGLPPAHSCSLVITSASPP 200
P T P S + P P +P A +P PPA + VI+ A+PP
Sbjct: 53 PPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPP 97
>At5g59700.1 68418.m07484 protein kinase, putative similar to
receptor-like protein kinase [Catharanthus roseus]
gi|1644291|emb|CAA97692
Length = 829
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 76 SPVGECTSSSYLALVCRVQLNNTLNSHM----LIETDVKQRKGHCVGA 207
S +G C ++ + LV N TL SH+ L+ KQR C+G+
Sbjct: 540 SLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLSLSWKQRLEICIGS 587
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -2
Query: 307 PTSYMRGPPESPLHASSPGLPPAHSCSLVITSASPP 200
P + PP P+++ P PP HS + S PP
Sbjct: 543 PPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPP 578
>At1g05370.1 68414.m00544 expressed protein
Length = 439
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 64 LKCTSPVGECTSSSYLALVCRVQLNNTLNSHMLIETDVKQRK-GHCVGA 207
LK T +G C SS + V R L +T+ L TD K GH GA
Sbjct: 264 LKSTDKIGSCASSRFAFTVSRDGL-DTVKPWCLTLTDTSSTKLGHNTGA 311
>At4g08370.1 68417.m01382 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 350
Score = 27.5 bits (58), Expect = 5.2
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = -2
Query: 310 LPTSYM-RGPPESPLHASSPGLPPAHSCSLVITSASPPRNVLCAA*HLSLSTYGSLTCCL 134
LP+ Y+ + PP SP SSP PP V S PP + + Y S
Sbjct: 46 LPSPYVYKSPPPSPYLYSSPPPPP-----YVYNSPPPPPPYIYNSPPRPPYVYKSPPPPP 100
Query: 133 TVLDKPVPDMNCLYIPQPATYISKS 59
V P P P P Y+ KS
Sbjct: 101 FVYSSPPPPTYIYNSPPPPPYVYKS 125
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = -2
Query: 376 PGMFLVPQYFGP*LTDPTITKVLPTSYMRGPPESPLHASSPGLPPAHSCS 227
P L P + P + P + PP +H SSP PP H S
Sbjct: 416 PSPPLPPPVYSPPPSPPVFSPPPSPPVYSPPPPPSIHYSSPPPPPVHHSS 465
>At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein
low similarity to SP|P25583 Karyogamy protein KAR4
{Saccharomyces cerevisiae},
(N6-adenosine)-methyltransferase [Mus musculus]
GI:10179948; contains Pfam profile PF05063: MT-A70
(S-adenosylmethionine-binding subunit of human mRNA:m6A
methyl-transferase (MTase))
Length = 775
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 307 PTSYMRGPPESPLHASSPGLPPAHSCSL 224
P + + PP SP+H+ +PG+ P S+
Sbjct: 431 PFANLGMPPPSPIHSLTPGMSPIPGTSV 458
>At3g09780.1 68416.m01161 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 775
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 420 YFLSMVCTRKRSYIRRGCSLCRNIS 346
+FLS CT I CSLC+N S
Sbjct: 392 FFLSSSCTANSDRICTPCSLCQNSS 416
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 27.1 bits (57), Expect = 6.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 307 PTSYMRGPPESPLHASSPGLPPAHSCSLVITSASPP 200
P Y + PP S +++S P PP +S S + SPP
Sbjct: 491 PKVYYKSPPPSYVYSSPP--PPYYSPSPKVYYKSPP 524
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Frame = -2
Query: 358 PQYFGP*LTDPTITKVLPTSYMRGPPESPLHASSPGL----PPAHSCSLVITSASPP 200
P + P P + P PP P+H+ P + PP HS + S PP
Sbjct: 513 PPVYSPPPPPPVYSPPPPPPVYSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPP 569
>At2g01570.1 68415.m00081 gibberellin response modulator (RGA1) /
gibberellin-responsive modulator identical to GB:Y11336,
member of SCARECROW family
Length = 587
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 383 IYAGDVPCAAIFRSVTDRSNHYESVTHFIHE-GSTGVAPARVFTGFTTRTQLLLS 222
+Y G C + DR +E+++ + + GS+G+APA + + + +LLS
Sbjct: 494 VYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLS 548
>At5g35190.1 68418.m04170 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 328
Score = 26.6 bits (56), Expect = 9.1
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Frame = -2
Query: 358 PQYFGP*LTDPTIT-KVLPTSYM-RGPPESPLHASSPGL-------PPAHSCSLVITSAS 206
P YF P P + K P Y+ PP P ++ SP + PP +S SL ++ S
Sbjct: 234 PPYFSP---SPKVDYKSPPPPYVYSSPPPPPYYSPSPEVSYKSPPPPPYYSPSLEVSYKS 290
Query: 205 PP 200
PP
Sbjct: 291 PP 292
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 328 PTITKVLPTSYMRGPPESPLH-ASSPGLPPAH 236
P+ + P + + PP P H +SSP PP H
Sbjct: 143 PSTPSLPPPTPKKSPPPPPSHHSSSPSNPPHH 174
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 328 PTITKVLPTSYMRGPPESPLHASSPGLPPAHSCSLVITSASPP 200
P + P PP +P+++ P PP HS + S PP
Sbjct: 729 PPVQSPPPPPVFSPPPPAPIYSPPP--PPVHSPPPPVHSPPPP 769
>At2g47240.1 68415.m05899 long-chain-fatty-acid--CoA ligase family
protein / long-chain acyl-CoA synthetase family protein
similar to GI:1617270 (MF7P) and gi:1617628 (MF45P) from
[Brassica napus] ; contains Pfam AMP-binding enzyme
domain PF00501
Length = 660
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 60 LPGVVAYNPKTVNRWA 13
L VV NP+TVNRWA
Sbjct: 556 LVAVVVPNPETVNRWA 571
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,062,559
Number of Sequences: 28952
Number of extensions: 283706
Number of successful extensions: 965
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 858708096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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