Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I13
(576 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 253 4e-67
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 253 4e-67
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 253 4e-67
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 253 4e-67
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 253 4e-67
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 253 4e-67
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 198 2e-50
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 171 1e-42
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 95 2e-19
U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine dehydro... 29 8.9
U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine dehydro... 29 8.9
BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.9
BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.9
BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.9
AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.9
AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.9
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 253 bits (619), Expect = 4e-67
Identities = 115/170 (67%), Positives = 139/170 (81%)
Frame = +2
Query: 2 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 181
L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV +
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 182 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 361
+ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 362 IKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 511
+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 253 bits (619), Expect = 4e-67
Identities = 115/170 (67%), Positives = 139/170 (81%)
Frame = +2
Query: 2 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 181
L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV +
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 182 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 361
+ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 362 IKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 511
+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 253 bits (619), Expect = 4e-67
Identities = 115/170 (67%), Positives = 139/170 (81%)
Frame = +2
Query: 2 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 181
L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV +
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 182 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 361
+ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 362 IKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 511
+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 253 bits (619), Expect = 4e-67
Identities = 115/170 (67%), Positives = 139/170 (81%)
Frame = +2
Query: 2 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 181
L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV +
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 182 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 361
+ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 362 IKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 511
+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 253 bits (619), Expect = 4e-67
Identities = 115/170 (67%), Positives = 139/170 (81%)
Frame = +2
Query: 2 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 181
L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV +
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 182 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 361
+ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRARAHSIQI 126
Query: 362 IKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 511
+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 253 bits (619), Expect = 4e-67
Identities = 115/170 (67%), Positives = 139/170 (81%)
Frame = +2
Query: 2 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 181
L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV +
Sbjct: 7 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQ 66
Query: 182 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 361
+ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 362 IKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 511
+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 127 MKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 198 bits (482), Expect = 2e-50
Identities = 88/129 (68%), Positives = 109/129 (84%)
Frame = +2
Query: 2 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 181
L+EY+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE V +
Sbjct: 7 LREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYCGQ 66
Query: 182 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 361
+ EKSP+++KNFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI
Sbjct: 67 VFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQI 126
Query: 362 IKVEVIKAA 388
+ VE I A+
Sbjct: 127 MMVEEIAAS 135
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 171 bits (417), Expect = 1e-42
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +2
Query: 179 EIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 358
++ EKSP+++KNFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQ
Sbjct: 30 QVFEKSPLRVKNFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 89
Query: 359 IIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 511
I+KVE I + CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 90 IMKVEEIAVSKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 94.7 bits (225), Expect = 2e-19
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = +2
Query: 314 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYK 493
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 494 RPSTYF 511
RP+T+F
Sbjct: 61 RPNTFF 66
>U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 58 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 147
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 58 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 147
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 58 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 147
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 58 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 147
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 58 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 147
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 58 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 147
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 58 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 147
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,408,147
Number of Sequences: 237096
Number of extensions: 1819631
Number of successful extensions: 3840
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3840
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -