Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I12
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    27   0.33 
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   4.0  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   9.3  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 27.5 bits (58), Expect = 0.33
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 260 IFPRGLEPATLKISISIIVNYPENLKSITRLNK*TISI 147
           + P+  EPA   +S ++  N+P  L+ I  L +  +SI
Sbjct: 678 LLPKESEPAGFSLSATLFTNHPHRLEIIPNLLRVFVSI 715


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 416 FCMFKDFRVSSSFKVLPLASNL-IACRSGYNE 324
           F  +K  R+     VL L +N  I C +GYNE
Sbjct: 8   FQCYKQLRIYKWIIVLMLIANSSILCMAGYNE 39


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 150 RNCLLIQTCNRFQIFWIIYNNGDRNFKRCWFQTSRKNS 263
           +NC  +     F I +I+Y    +NF++  F   +K S
Sbjct: 411 QNCCQLFFMTNFGINFILYCVSGQNFRKAIFGMFQKRS 448


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,094
Number of Sequences: 2352
Number of extensions: 12354
Number of successful extensions: 56
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)