Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I12
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   2.8  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   4.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   4.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   4.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   4.9  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   6.5  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   6.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   6.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   6.5  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   8.6  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 198 IIYNNGDRNFKR 233
           IIYNN D +F+R
Sbjct: 212 IIYNNSDNSFQR 223


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +3

Query: 198 IIYNNGDRNFKRCWFQTSRKNSVK 269
           IIY N D +F R    T   NS K
Sbjct: 212 IIYQNADDSFHRLSSHTLNHNSDK 235


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 198 IIYNNGDRNFKR 233
           IIYNN D +F+R
Sbjct: 211 IIYNNADDSFQR 222


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 380 FKVLPLASNLIACRSGYNEV 321
           F  LPL   ++  R+G+NE+
Sbjct: 255 FTSLPLEDQVLLLRAGWNEL 274


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 380 FKVLPLASNLIACRSGYNEV 321
           F  LPL   ++  R+G+NE+
Sbjct: 255 FTSLPLEDQVLLLRAGWNEL 274


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 6   TCLTYVVRTENGTILLLAAQSTLPIYL 86
           T +TYV + + GT+    + ++L  YL
Sbjct: 212 TAITYVWKNDEGTLRKSPSLTSLNAYL 238


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 6   TCLTYVVRTENGTILLLAAQSTLPIYL 86
           T +TYV + + GT+    + ++L  YL
Sbjct: 212 TAITYVWKNDEGTLRKSPSLTSLNAYL 238


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 6   TCLTYVVRTENGTILLLAAQSTLPIYL 86
           T +TYV + + GT+    + ++L  YL
Sbjct: 263 TAITYVWKNDEGTLRKSPSLTSLNAYL 289


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 6   TCLTYVVRTENGTILLLAAQSTLPIYL 86
           T +TYV + + GT+    + ++L  YL
Sbjct: 212 TAITYVWKNDEGTLRKSPSLTSLNAYL 238


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 461 QDICGPKSLTYSLYPFCMFKDFRVSSSFKV 372
           Q +C PK LT+ L    + K   +  +  V
Sbjct: 153 QPMCSPKLLTFDLKTSKLVKQVEIPHNIAV 182


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,676
Number of Sequences: 438
Number of extensions: 4100
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)