Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I11
(558 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4LAF9 Cluster: Beta-hexosaminidase; n=7; Obtectomera|R... 152 6e-36
UniRef50_Q3L6N3 Cluster: Beta-N-acetylglucosaminidase isoform B;... 136 4e-31
UniRef50_UPI0000D56A45 Cluster: PREDICTED: similar to Beta-hexos... 96 4e-19
UniRef50_UPI0000D56A46 Cluster: PREDICTED: similar to Beta-hexos... 73 3e-12
UniRef50_Q7YTB2 Cluster: Putative beta-N-acetylhexosaminidase; n... 64 3e-09
UniRef50_P07686 Cluster: Beta-hexosaminidase beta chain precurso... 42 0.010
UniRef50_Q17QW6 Cluster: Similar to Beta-hexosaminidase beta cha... 42 0.013
UniRef50_A7RET7 Cluster: Predicted protein; n=1; Nematostella ve... 41 0.017
UniRef50_UPI0000E20875 Cluster: PREDICTED: hexosaminidase B isof... 41 0.022
UniRef50_Q4S2C8 Cluster: Chromosome undetermined SCAF14764, whol... 37 0.28
UniRef50_A4SAM7 Cluster: Predicted protein; n=1; Ostreococcus lu... 35 1.1
UniRef50_A0DTK0 Cluster: Chromosome undetermined scaffold_63, wh... 34 2.0
UniRef50_Q4WUQ7 Cluster: Signal transduction protein Syg1, putat... 34 2.6
UniRef50_A0BZ70 Cluster: Chromosome undetermined scaffold_138, w... 33 3.4
UniRef50_Q4X125 Cluster: C6 finger domain protein, putative; n=4... 33 3.4
UniRef50_A0GMC7 Cluster: YadA-like precursor; n=2; Burkholderia|... 33 4.5
UniRef50_UPI00006615CF Cluster: Homolog of Homo sapiens "Golgi a... 33 6.0
UniRef50_UPI0000D5643F Cluster: PREDICTED: similar to CG3523-PA;... 32 7.9
UniRef50_Q54K55 Cluster: Putative uncharacterized protein; n=1; ... 32 7.9
UniRef50_A0DE06 Cluster: Chromosome undetermined scaffold_47, wh... 32 7.9
UniRef50_A2QVA6 Cluster: Remark: Ag2 from C. immitis encodes an ... 32 7.9
>UniRef50_A4LAF9 Cluster: Beta-hexosaminidase; n=7; Obtectomera|Rep:
Beta-hexosaminidase - Ostrinia furnacalis (Asian corn
borer)
Length = 557
Score = 152 bits (368), Expect = 6e-36
Identities = 71/172 (41%), Positives = 105/172 (61%)
Frame = +3
Query: 39 MLRHLLLFGVYGVFFAASLNIVIPGPQYPPTKGEVWPKPQIQVKDDKYYTFDPAVFTVKE 218
ML + LL + VF+++++ PGP+YPPTKGEVWPKPQ Q + Y+T + + F +K
Sbjct: 1 MLLYSLLICGFCVFYSSAIYNNNPGPKYPPTKGEVWPKPQYQKLERYYFTVNTSAFKIKA 60
Query: 219 PFQKCDFLTKALERYQFLVRDLHRITRRFVKRSLGSQYRSLDDEAANDERFQGTVQELHV 398
C L KA+ERY F++R+ + ++ S++R + + D +QG ++EL +
Sbjct: 61 TNHTCPILAKAIERYSFIMRNTFNLDLN--RKPKTSRHRLPRETNSEDPYYQGLLKELDI 118
Query: 399 ELTAPCEKLPYFGMDESYNLXXXXXXXXXXXXIWGVIRGLETWSQLFYLTND 554
EL +PCE+ PYF MDESY L IWG++RGLE+WS L YLT+D
Sbjct: 119 ELISPCEEYPYFNMDESYELTISTTAKLLSSSIWGILRGLESWSHLLYLTDD 170
>UniRef50_Q3L6N3 Cluster: Beta-N-acetylglucosaminidase isoform B;
n=1; Bombyx mori|Rep: Beta-N-acetylglucosaminidase
isoform B - Bombyx mori (Silk moth)
Length = 508
Score = 136 bits (328), Expect = 4e-31
Identities = 64/172 (37%), Positives = 100/172 (58%)
Frame = +3
Query: 39 MLRHLLLFGVYGVFFAASLNIVIPGPQYPPTKGEVWPKPQIQVKDDKYYTFDPAVFTVKE 218
M R + + G F L+IV PGP+YP +KG +WP+PQ+Q + YY FD + +K
Sbjct: 1 MFRLFVYLNILGAFLVTGLHIVEPGPEYPASKGAIWPRPQMQSIEIPYYKFDSDILEIKV 60
Query: 219 PFQKCDFLTKALERYQFLVRDLHRITRRFVKRSLGSQYRSLDDEAANDERFQGTVQELHV 398
C L+ A++R ++R++ RI +V R+ Q LDD+ + G ++ L +
Sbjct: 61 VDHDCPILSNAVQRSLAVLREMLRIASPYVNRNAPQQV--LDDDT-----YDGPLKSLSI 113
Query: 399 ELTAPCEKLPYFGMDESYNLXXXXXXXXXXXXIWGVIRGLETWSQLFYLTND 554
LT+PCE+ P+FGM ESYNL IWG++RGLE+W+ LF+L+++
Sbjct: 114 YLTSPCEEYPHFGMIESYNLTIAADSTLRSSSIWGILRGLESWTHLFHLSDN 165
>UniRef50_UPI0000D56A45 Cluster: PREDICTED: similar to
Beta-hexosaminidase alpha chain precursor
(N-acetyl-beta-glucosaminidase)
(Beta-N-acetylhexosaminidase) (Hexosaminidase A); n=2;
Tribolium castaneum|Rep: PREDICTED: similar to
Beta-hexosaminidase alpha chain precursor
(N-acetyl-beta-glucosaminidase)
(Beta-N-acetylhexosaminidase) (Hexosaminidase A) -
Tribolium castaneum
Length = 545
Score = 96.3 bits (229), Expect = 4e-19
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 5/173 (2%)
Frame = +3
Query: 54 LLFGVYGVFFAASLNIVI-PGPQYPPTKGEVWPKPQIQVK-DDKYYTFDPAVFTVKEPFQ 227
L F + + F ++ + + PGP P +KGE+WPKPQ + K DD +++ P F
Sbjct: 5 LFFLLLIISFCSAFDFIFQPGPLVPASKGEIWPKPQHENKLDDGFFSLLPTFFHFNPIGN 64
Query: 228 KCDFLTKALERYQFLVRDLHRITRRFVKRSLGSQYRSLDDEAANDERFQGTVQELHVELT 407
C+ LT+AL+RY+ L+ R +K Y++ D+ F G + + VELT
Sbjct: 65 ICNTLTEALDRYRKLII----FNNRRIKEVY---YKARSCYEGGDQNFLGYLTSVEVELT 117
Query: 408 APC--EKLPYFGMDESYNLXXXXXXXXXXXX-IWGVIRGLETWSQLFYLTNDF 557
C E+ P F M E Y + IWG++RGLET+SQL YLT+D+
Sbjct: 118 GACNDEEYPSFEMKEEYVVNVTSTVQRISSDTIWGILRGLETFSQLIYLTDDY 170
>UniRef50_UPI0000D56A46 Cluster: PREDICTED: similar to
Beta-hexosaminidase alpha chain precursor
(N-acetyl-beta-glucosaminidase)
(Beta-N-acetylhexosaminidase) (Hexosaminidase A); n=1;
Tribolium castaneum|Rep: PREDICTED: similar to
Beta-hexosaminidase alpha chain precursor
(N-acetyl-beta-glucosaminidase)
(Beta-N-acetylhexosaminidase) (Hexosaminidase A) -
Tribolium castaneum
Length = 531
Score = 73.3 bits (172), Expect = 3e-12
Identities = 56/165 (33%), Positives = 75/165 (45%), Gaps = 6/165 (3%)
Frame = +3
Query: 78 FFAASLNIVIPGPQYPPTKGEVWPKPQIQVKDDKYYTFDPAVFTVKEPFQ-KC-DFLTKA 251
FF + PGP +KG VWPKPQ Q + YY P FT + P C FL A
Sbjct: 9 FFFVYTFAIRPGPVIQASKGAVWPKPQQQEVSETYYLIRPHSFTFEAPVNIGCPSFLDDA 68
Query: 252 LERYQFLVRDLHRITRRFVKRSLGSQYRSLDDEAANDERFQGTVQELHVELTAPCEK--- 422
L RY ++ IT + ++ + + + LDD F G ++ L + L C
Sbjct: 69 LTRYWTIIAT--SITSK-LEETPEANFWELDD------NFLGYLETLTITLLGECPNENI 119
Query: 423 LPYFGMDESYNL-XXXXXXXXXXXXIWGVIRGLETWSQLFYLTND 554
LP +E+Y L IWGV+RGLET+SQL Y D
Sbjct: 120 LPELHDNENYTLTVDSEGAFLESETIWGVLRGLETFSQLIYAEQD 164
>UniRef50_Q7YTB2 Cluster: Putative beta-N-acetylhexosaminidase; n=3;
Deuterostomia|Rep: Putative beta-N-acetylhexosaminidase
- Phallusia mammilata
Length = 537
Score = 63.7 bits (148), Expect = 3e-09
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Frame = +3
Query: 135 GEVWPKPQIQVKDDKYYTF--DPAVFTVKEPFQKCDFLTKALERYQFLV-RDLHRITRRF 305
G VWP+PQ + Y + F KCD LT+A +RY+ L+ ++ I ++
Sbjct: 38 GSVWPQPQHYSSTTQTYAVVAEAFQFVYSSTSHKCDLLTEAFKRYETLIYNNVATIKLKY 97
Query: 306 VKRSLGSQYRSLDDEAANDERFQGTVQELHVELTAPCEKLPYFGMDESYNLXXXXXXXXX 485
R + S ++ L V+L +PCE P M ESY L
Sbjct: 98 FPRDVAS------------------IKTLEVDLMSPCEDYPSDHMKESYALDVADKASLT 139
Query: 486 XXXIWGVIRGLETWSQLFYLTN 551
+WG++RGLET+SQL + ++
Sbjct: 140 SDTVWGILRGLETFSQLLWASD 161
>UniRef50_P07686 Cluster: Beta-hexosaminidase beta chain precursor
(EC 3.2.1.52) (N-acetyl-beta- glucosaminidase)
(Beta-N-acetylhexosaminidase) (Hexosaminidase B)
(Cervical cancer proto-oncogene 7 protein) (HCC-7)
[Contains: Beta- hexosaminidase beta-B chain;
Beta-hexosaminidase beta-A chain]; n=86;
Euteleostomi|Rep: Beta-hexosaminidase beta chain
precursor (EC 3.2.1.52) (N-acetyl-beta- glucosaminidase)
(Beta-N-acetylhexosaminidase) (Hexosaminidase B)
(Cervical cancer proto-oncogene 7 protein) (HCC-7)
[Contains: Beta- hexosaminidase beta-B chain;
Beta-hexosaminidase beta-A chain] - Homo sapiens (Human)
Length = 556
Score = 41.9 bits (94), Expect = 0.010
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 381 VQELHVELT--APCEKLPYFGMDESYNLXXXXXXXXXXXX-IWGVIRGLETWSQLFY 542
VQ+L V +T + C+ P DESY L +WG +RGLET+SQL Y
Sbjct: 124 VQQLLVSITLQSECDAFPNISSDESYTLLVKEPVAVLKANRVWGALRGLETFSQLVY 180
>UniRef50_Q17QW6 Cluster: Similar to Beta-hexosaminidase beta chain;
n=5; Laurasiatheria|Rep: Similar to Beta-hexosaminidase
beta chain - Bos taurus (Bovine)
Length = 284
Score = 41.5 bits (93), Expect = 0.013
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 387 ELHVELTAPCEKLPYFGMDESYNLXXXXXXXXXXXX-IWGVIRGLETWSQLFY 542
E+ V + C+ P DESY L +WGV+RGLET+SQL Y
Sbjct: 108 EVSVIMDPECDSFPSITSDESYTLLVKGPVATLTANRVWGVLRGLETFSQLIY 160
>UniRef50_A7RET7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 544
Score = 41.1 bits (92), Expect = 0.017
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
Frame = +3
Query: 132 KGEVWPKPQIQVKDDKYYTFDPAVFTVKEPFQKCDFLTKALERYQFLVRDLHRITRRFVK 311
+G +WP PQ Q D K ++ P F+ + D L A+ RY L +T++
Sbjct: 47 QGSIWPNPQAQKPDGKVFSLLPNKFSFSINGKTSDVLKAAVNRYMNLTFPDFTVTKK--- 103
Query: 312 RSLGSQYRSLDDEAANDERFQGTVQELHVELTAPCEKLPYFGMDESYNL-XXXXXXXXXX 488
DD+ F + + V+ P + DESY L
Sbjct: 104 ----------DDKLP----FMEGAEVIVVDDYKPMD----LTTDESYTLTVTAPQSSIYA 145
Query: 489 XXIWGVIRGLETWSQLFYLTND 554
+WG +RGLET+SQ+ + + D
Sbjct: 146 YTVWGALRGLETFSQIVHQSED 167
>UniRef50_UPI0000E20875 Cluster: PREDICTED: hexosaminidase B isoform
4; n=1; Pan troglodytes|Rep: PREDICTED: hexosaminidase B
isoform 4 - Pan troglodytes
Length = 527
Score = 40.7 bits (91), Expect = 0.022
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 381 VQELHVELT--APCEKLPYFGMDESYNLXXXXXXXXXXXX-IWGVIRGLETWSQLFY 542
+Q+L V +T + C+ P DESY L +WG +RGLET+SQL Y
Sbjct: 124 LQQLLVSITLQSECDAFPNISSDESYTLLVKEPVAVLKANRVWGALRGLETFSQLVY 180
>UniRef50_Q4S2C8 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF14764, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 571
Score = 37.1 bits (82), Expect = 0.28
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +3
Query: 297 RRFVKRSLGSQYRSLDDEAANDERFQGTVQELHVELTAP---CEKLPYFGMDESYNLXXX 467
RR+ + GS RS ++ N + EL V +T+ C+ P DESY L
Sbjct: 89 RRYYEYMFGSAKRSGKNK--NRRSGASDLTELQVWITSTDSDCDAYPNVKSDESYELTVD 146
Query: 468 XXXXXXXXX-IWGVIRGLETWSQLFY 542
+WG + GLET+SQL +
Sbjct: 147 QPFAVLKAPKVWGALHGLETFSQLIF 172
>UniRef50_A4SAM7 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 125
Score = 35.1 bits (77), Expect = 1.1
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 453 CSFHPCQSKGASRTVQSVPRATPELSLGIVHRLQLHHPNS-CTD 325
C+ C+ KGA RT++++ R EL LG+ R+Q S C D
Sbjct: 47 CASKECKRKGALRTLETLTRRASELELGVAVRVQTTRCQSECAD 90
>UniRef50_A0DTK0 Cluster: Chromosome undetermined scaffold_63, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_63,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 351
Score = 34.3 bits (75), Expect = 2.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 150 KPQIQVKDDKYYTFDPAVFTVKEP 221
KPQ +V D+ Y+ F+P +FTVK P
Sbjct: 114 KPQEEVIDNPYHNFEPLIFTVKAP 137
>UniRef50_Q4WUQ7 Cluster: Signal transduction protein Syg1,
putative; n=5; Eurotiomycetidae|Rep: Signal transduction
protein Syg1, putative - Aspergillus fumigatus (Sartorya
fumigata)
Length = 996
Score = 33.9 bits (74), Expect = 2.6
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 147 PKPQIQVKDDKYYTF-DPAVFTVKEPFQKCDFLTKALERYQFLVRDLHRITRRFVKRSLG 323
P +++ ++D+++ F D + ++ +Q + +A +R Q L + LH + R ++ LG
Sbjct: 247 PVSEVERREDEFFAFLDGELAKIESFYQMKE--DEATQRLQVLRQQLHIMRDRRIQEILG 304
Query: 324 SQYRSLDDEAANDERFQGTVQEL 392
++ +S DEA F GT+ L
Sbjct: 305 TKSKSKKDEAHQSNGF-GTLNAL 326
>UniRef50_A0BZ70 Cluster: Chromosome undetermined scaffold_138,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_138,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 640
Score = 33.5 bits (73), Expect = 3.4
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +3
Query: 264 QFLVRDLHRITRRFVKRSLGSQYRSLDDEAANDERFQ 374
+F+ R + +ITR+ + +S+G RS+ ++A ND+ FQ
Sbjct: 105 RFITRSMFQITRQPLLKSMGIDIRSILNKAMNDKEFQ 141
>UniRef50_Q4X125 Cluster: C6 finger domain protein, putative; n=4;
Trichocomaceae|Rep: C6 finger domain protein, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 1058
Score = 33.5 bits (73), Expect = 3.4
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 117 QYPPTKGEVWPKPQIQVKDDKYYTFDPAVFTVKEPF-QKCD-FLTKALERYQFLVRDLHR 290
Q+PP + WP+P + V + + + DP P Q CD L + Y L + H+
Sbjct: 232 QFPPQQASAWPEPPVPVMNPQGTSMDPTPAFATAPIPQVCDHILIGLVTSYSTLYQKFHQ 291
>UniRef50_A0GMC7 Cluster: YadA-like precursor; n=2;
Burkholderia|Rep: YadA-like precursor - Burkholderia
phytofirmans PsJN
Length = 877
Score = 33.1 bits (72), Expect = 4.5
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 295 QGGLSKGV*EVS-TGVWMMKLQTMNDSKGQFRSCTWN*LH 411
Q L+ GV ++S TG W+ KLQ DS+GQF + +H
Sbjct: 837 QSALAIGVSQISETGKWVYKLQGTTDSRGQFGAAVGAGMH 876
>UniRef50_UPI00006615CF Cluster: Homolog of Homo sapiens "Golgi
autoantigen, golgin subfamily B member 1; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens "Golgi autoantigen,
golgin subfamily B member 1 - Takifugu rubripes
Length = 4286
Score = 32.7 bits (71), Expect = 6.0
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 255 ERYQFLVRDLHRITRRFVKR--SLGSQYRSLDDEAANDERFQGTVQELHVELTAPCEKL 425
E+Y + +L R+ +R + + LDD A ER T + L EL+A C+KL
Sbjct: 1942 EKYAANLEELQDARRQLSQRMDEVSGLQKLLDDSARQRERASSTTETLRSELSAVCQKL 2000
>UniRef50_UPI0000D5643F Cluster: PREDICTED: similar to CG3523-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG3523-PA - Tribolium castaneum
Length = 2180
Score = 32.3 bits (70), Expect = 7.9
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 66 VYGVFFAASLNIVIPGPQYPPTKGEVWPKPQIQVKDDK-YYTFDPAVFTVKEPFQKCDFL 242
+Y + LN + P ++P ++G P ++ D+ +YT+ FT+ + Q+ F+
Sbjct: 678 LYELGHTPQLNQLYPKVEFPVSRGTGMISPLVKWNHDRSWYTYKFREFTITDAEQRDYFI 737
Query: 243 TKALERYQFL 272
+ + Y+F+
Sbjct: 738 SYVYDEYKFM 747
>UniRef50_Q54K55 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 560
Score = 32.3 bits (70), Expect = 7.9
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 378 TVQELHVELTAPCEKLPYFGMDESYNLXXXXXXXXXXXX--IWGVIRGLETWSQL 536
T+ +L++ L + E L FG DESY L ++G++RGLET+ QL
Sbjct: 104 TLNKLNINLKSKNEILK-FGFDESYKLIIKNNENSKLEGNTVYGIMRGLETFYQL 157
>UniRef50_A0DE06 Cluster: Chromosome undetermined scaffold_47, whole
genome shotgun sequence; n=2; Eukaryota|Rep: Chromosome
undetermined scaffold_47, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 3398
Score = 32.3 bits (70), Expect = 7.9
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 198 AVFTVKEPFQKCDFLTKALERYQFLVRDLHRITRRF--VKRSLGSQYRSLDDEAANDERF 371
A FT+ E ++C K L + + D H++ ++ L YRSL ++ N E+
Sbjct: 2288 ADFTL-ERAKQCSLAVKYLYSWVRAIYDYHKVVMETQPIRDELEESYRSLKEKTVNLEQK 2346
Query: 372 QGTVQELHVELTAPCE 419
+ VQE++++L CE
Sbjct: 2347 KKEVQEINMKL-EECE 2361
>UniRef50_A2QVA6 Cluster: Remark: Ag2 from C. immitis encodes an
immunoreactive protein. precursor; n=2; Aspergillus
niger|Rep: Remark: Ag2 from C. immitis encodes an
immunoreactive protein. precursor - Aspergillus niger
Length = 223
Score = 32.3 bits (70), Expect = 7.9
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -3
Query: 442 SMPK*GSFSHGAVSSTCNS*TVPWNRSSFAASSSK 338
SMP+ + GAVSS+ S T+P SS AASSSK
Sbjct: 122 SMPRTSTTDSGAVSSSAASATLPTVSSSGAASSSK 156
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,142,615
Number of Sequences: 1657284
Number of extensions: 12685168
Number of successful extensions: 32007
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 30936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31991
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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