BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I11
(558 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119086-1|AAM50946.1| 477|Drosophila melanogaster LP11230p pro... 29 4.3
AE014296-1941|AAN11886.2| 477|Drosophila melanogaster CG7573-PB... 29 4.3
AE014296-1940|AAF50072.2| 509|Drosophila melanogaster CG7573-PA... 29 4.3
AY113213-1|AAM29218.1| 975|Drosophila melanogaster AT07178p pro... 28 7.4
AE014296-856|AAN11603.1| 440|Drosophila melanogaster CG32241-PA... 28 9.8
>AY119086-1|AAM50946.1| 477|Drosophila melanogaster LP11230p
protein.
Length = 477
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 221 WFLYCKYSWVKCIIFIVFHLYLRFR--PNLPFCWRILWPRYN 102
W+ Y +W+ VF YL R P+L + +L PRYN
Sbjct: 129 WYHYADSTWLNVTFMTVFSTYLVVRKLPSLFYEKLVLDPRYN 170
>AE014296-1941|AAN11886.2| 477|Drosophila melanogaster CG7573-PB,
isoform B protein.
Length = 477
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 221 WFLYCKYSWVKCIIFIVFHLYLRFR--PNLPFCWRILWPRYN 102
W+ Y +W+ VF YL R P+L + +L PRYN
Sbjct: 129 WYHYADSTWLNVTFMTVFSTYLVVRKLPSLFYEKLVLDPRYN 170
>AE014296-1940|AAF50072.2| 509|Drosophila melanogaster CG7573-PA,
isoform A protein.
Length = 509
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 221 WFLYCKYSWVKCIIFIVFHLYLRFR--PNLPFCWRILWPRYN 102
W+ Y +W+ VF YL R P+L + +L PRYN
Sbjct: 161 WYHYADSTWLNVTFMTVFSTYLVVRKLPSLFYEKLVLDPRYN 202
>AY113213-1|AAM29218.1| 975|Drosophila melanogaster AT07178p
protein.
Length = 975
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/100 (23%), Positives = 40/100 (40%)
Frame = +2
Query: 62 WCVWRIFCRQFKHCYTWATISANKRGGLAETSNTSERR*ILYI*PSCIYSKGTIPKMRFS 241
WC +F + Y W+T N RG + +E R + CI + TI +S
Sbjct: 478 WCQREMFQDSKPYSYYWSTTHPNVRGEVKRRLKEAESRRSCGVRQRCI--QPTICSRDYS 535
Query: 242 NKGAGEVSIPCARFTSYYKEVCQKEFRKSVQEFG**SCKR 361
++ C TS ++++ +K S+ +C R
Sbjct: 536 DQSED----VCTCSTSTHQQIVEKTSSDSLNHHNHLTCSR 571
>AE014296-856|AAN11603.1| 440|Drosophila melanogaster CG32241-PA
protein.
Length = 440
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 108 PGPQYPPTKGEVWPKPQIQVKDDKYYTFDPAV-FTVKEP 221
P P PP K P P +KDD Y+ P+V F V P
Sbjct: 207 PPPPPPPKKVVYTPPPTGILKDDGYHYGQPSVKFEVSAP 245
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 108 PGPQYPPTKGEVWPKPQIQVKDDKYYTFDPAV-FTVKEP 221
P P PP K P P +KDD Y+ P+V F V P
Sbjct: 307 PPPPPPPKKVVYTPPPTGILKDDGYHYGQPSVKFEVSAP 345
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,936,777
Number of Sequences: 53049
Number of extensions: 604599
Number of successful extensions: 1385
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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