Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I11
         (558 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     25   0.52 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.8  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   6.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   6.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   6.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   6.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   8.4  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +3

Query: 108 PGPQYPPTKGEVWPKPQIQVKDDKYYTF 191
           P PQYP T   +  +P I+    + + +
Sbjct: 438 PSPQYPSTSSHILQQPSIRTYTQQQFPY 465


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 551 VCKIEELRPSFQASYNAPYRCACHSSGRC 465
           V K+E +   + A    P  C CH+  RC
Sbjct: 459 VYKVETVGDKYMAVSGLPEPCRCHA--RC 485


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 551 VCKIEELRPSFQASYNAPYRCACHSSGRC 465
           V K+E +   + A    P  C CH+  RC
Sbjct: 459 VYKVETVGDKYMAVSGLPEPCRCHA--RC 485


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 47  ASIIVWCVWRIFCRQFKHCY 106
           A + +W     F +QF HCY
Sbjct: 411 AGMWMWLSCSSFFQQFFHCY 430


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 41  ATASIIVWCVW 73
           AT  II WC W
Sbjct: 381 ATDKIIRWCTW 391


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 41  ATASIIVWCVW 73
           AT  II WC W
Sbjct: 381 ATDKIIRWCTW 391


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 41  ATASIIVWCVW 73
           AT  II WC W
Sbjct: 381 ATDKIIRWCTW 391


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 31  ISICYGIYYCLVCMAYFLPPV 93
           IS+ YG+  CLV  A  L  V
Sbjct: 275 ISLYYGVSICLVTFASALAVV 295


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,967
Number of Sequences: 438
Number of extensions: 4025
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)