Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I07
         (555 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.5  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +1

Query: 178 PLSIPAYNRFGGDPSYSTNSVSGSSAGLMSLKGGYTGHIYLKSIQRRPVPPVKWPSSTPL 357
           P S+P       +P+YS+ SV  +S   +     Y   +Y      +P P          
Sbjct: 81  PSSLPTQRTSTSNPTYSSRSVM-TSCSSVPTTASYGSDLYFPGATSQP-PTDNSHVHHHQ 138

Query: 358 TTPVVLIPGLYTYHL 402
           T+ +  + G  T+HL
Sbjct: 139 TSLLGKVEGAATHHL 153


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -3

Query: 541 CSFASPAGACGA-WISCVKIIVTVSFCLKAQC 449
           C F       G+ WI  + + + V +C+K +C
Sbjct: 36  CVFGKQVRELGSQWIPDLGVPIGVLYCMKCEC 67


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +1

Query: 19  NAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPAY 198
           +A+     DK   +  + A  P   IS +   T+A+Q+ P   LT    YQ+     P Y
Sbjct: 121 SALQRARADKTYRRSYTHAKPPYSYISLI---TMAIQNSPQKMLTLSEIYQFIMDLFPFY 177

Query: 199 NR 204
            +
Sbjct: 178 RQ 179


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 458  FQAKRNCYNDFDTGNPSTTRASR*R 532
            +Q     YN   TG+PS T   R R
Sbjct: 1463 YQVYAKAYNSIGTGDPSDTLNPRTR 1487


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 323 YLL*NGLVQRH*PHRSY*FLDFIHIIWKTIAGQKAC*TSLVIALCFQAK 469
           YLL +  VQR+  ++ Y  L  +  I+ T+     C  +  + L  Q +
Sbjct: 146 YLLFDYFVQRNQEYKYYQILSHLSGIFFTVFNVAQCYLTTELVLMLQTR 194


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 118 VALQSLPSPQLTADTSYQYQPLSIPAY 198
           +A+++ P  +LT +  Y+Y   + P Y
Sbjct: 94  MAIRNSPEKRLTLNGIYEYIMRNFPYY 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,878
Number of Sequences: 336
Number of extensions: 2995
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)