Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I07
         (555 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g62360.1 68416.m07005 expressed protein                             36   0.024
At1g58340.1 68414.m06636 MATE efflux protein-related contains Pf...    32   0.22 
At4g29140.1 68417.m04170 MATE efflux protein-related several hyp...    31   0.39 
At3g51550.1 68416.m05645 protein kinase family protein contains ...    31   0.39 
At4g23030.1 68417.m03321 MATE efflux protein-related contains Pf...    30   0.90 
At5g19700.1 68418.m02343 MATE efflux protein-related contains Pf...    29   1.6  
At5g28690.1 68418.m03520 expressed protein                             28   3.6  
At2g39290.1 68415.m04824 phosphatidylglycerolphosphate synthase ...    28   3.6  
At3g18380.2 68416.m02338 expressed protein                             28   4.8  
At3g18380.1 68416.m02337 expressed protein                             28   4.8  
At2g38510.1 68415.m04732 MATE efflux protein-related contains Pf...    28   4.8  
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi...    27   6.4  
At2g38490.1 68415.m04728 CBL-interacting protein kinase 22, puta...    27   8.4  

>At3g62360.1 68416.m07005 expressed protein
          Length = 1227

 Score = 35.5 bits (78), Expect = 0.024
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
 Frame = +1

Query: 13   ETNAVNAES-VDKPAFQESSFA---SVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQP 180
            ET+ ++A S V  P + +  +A   S P Y I  + P + + Q L    +  ++    + 
Sbjct: 839  ETSTLSAGSFVAGPLYDDIPYATEASKPGYHIKRLGPYSFSCQKLGQISVRVNSKDNAET 898

Query: 181  LSIPAYNRFGGDPSYSTNSVSGSSAGLMSLKGGYTGHIYLKSI 309
               P      GD  Y  NS+SG + GL      + G+ YL+ +
Sbjct: 899  SIPPLLLSLSGDHGYRNNSISG-AGGLFVFDSLFPGNFYLRPL 940


>At1g58340.1 68414.m06636 MATE efflux protein-related contains Pfam
           profile: PF01554 uncharacterized membrane protein family
           UPF0013
          Length = 532

 Score = 32.3 bits (70), Expect = 0.22
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 176 WYWYEVSAVNCGLGSDCRATVPGLTLEISYT 84
           W+WYE   + CGL ++ RATV  + + I  T
Sbjct: 298 WWWYEFMIILCGLLANPRATVASMGILIQTT 328


>At4g29140.1 68417.m04170 MATE efflux protein-related several
           hypothetical proteins - Arabidopsis thaliana; contains
           Pfam profile PF01554: Uncharacterized membrane protein
           family
          Length = 532

 Score = 31.5 bits (68), Expect = 0.39
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 176 WYWYEVSAVNCGLGSDCRATVPGLTLEISYT 84
           W+WYE+  V CGL  + R+TV  + + I  T
Sbjct: 296 WWWYEIMIVLCGLLVNPRSTVAAMGVLIQTT 326


>At3g51550.1 68416.m05645 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 895

 Score = 31.5 bits (68), Expect = 0.39
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +1

Query: 22  AVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQP 180
           A++   V+KP + +S    V ++ ++           +P PQ+TAD S   +P
Sbjct: 385 ALHPNPVNKPEYYDSLLNGVEIFKMNTSDGNLAGTNPIPGPQVTADPSKVLRP 437


>At4g23030.1 68417.m03321 MATE efflux protein-related contains Pfam
           profile PF01554: Uncharacterized membrane protein family
          Length = 502

 Score = 30.3 bits (65), Expect = 0.90
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 176 WYWYEVSAVNCGLGSDCRATVPGLTLEISYT 84
           W+WYE+  + CGL  + +ATV  + + I  T
Sbjct: 273 WWWYEIMILLCGLLLNPQATVASMGILIQTT 303


>At5g19700.1 68418.m02343 MATE efflux protein-related contains Pfam
           profile PF01554: Uncharacterized membrane protein family
          Length = 508

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 191 GIDNGWYWYEVSAVNCGLGSDCRATVPGLTLEISYT 84
           G+   W+WYE+  V CGL  D    V  + + I  T
Sbjct: 271 GVCLEWWWYEIMTVLCGLLIDPSTPVASMGILIQTT 306


>At5g28690.1 68418.m03520 expressed protein
          Length = 192

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +1

Query: 112 GTVALQSLPSPQLTADTSYQYQPLSIPAYNRFGGDPSYSTNSVSGSS 252
           G     +LP+  L    + Q  PL  P+ +  GGD S S+ SVS SS
Sbjct: 104 GQKLCNTLPALDLYFAVNRQLSPLPSPSSSN-GGDGSLSSTSVSSSS 149


>At2g39290.1 68415.m04824 phosphatidylglycerolphosphate synthase
           (PGS1) identical to phosphatidylglycerolphosphate
           synthase GI:13365519 from [Arabidopsis thaliana]
          Length = 296

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +1

Query: 223 YSTNSVSGSSAGLMSLKGGYTGHIYLKSIQRRPVPPVKWPSSTPLTTPVVLIPG 384
           +S++S S  S    S +  ++GH  L S      PP +  SS  LT P VL  G
Sbjct: 62  FSSSSSSEQSRPTSSSRNSFSGHGQLDSDDNSSPPPSQ-SSSKVLTLPTVLTLG 114


>At3g18380.2 68416.m02338 expressed protein
          Length = 349

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +1

Query: 100 NVRPGTVALQSLPSPQLTADTSYQYQPLSIPAYNRFGGDPSYSTNSVSGS 249
           N  PG + + S+P   L        QPLS+P      G+    T + SGS
Sbjct: 79  NKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSGS 128


>At3g18380.1 68416.m02337 expressed protein
          Length = 348

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +1

Query: 100 NVRPGTVALQSLPSPQLTADTSYQYQPLSIPAYNRFGGDPSYSTNSVSGS 249
           N  PG + + S+P   L        QPLS+P      G+    T + SGS
Sbjct: 79  NKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSGS 128


>At2g38510.1 68415.m04732 MATE efflux protein-related contains Pfam
           profile PF01554: Uncharacterized membrane protein family
          Length = 486

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 176 WYWYEVSAVNCGLGSDCRATVPGLTLEISYTG 81
           ++WYE+    CGL  + +A+V  + + I  TG
Sbjct: 247 YWWYEIMLFLCGLLGNPKASVAAMGILIQTTG 278


>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
           protein low similarity to SP|Q99615 DnaJ homolog
           subfamily C member 7 (Tetratricopeptide repeat protein
           2) {Homo sapiens}; contains Pfam profile PF00515: TPR
           Domain
          Length = 721

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +1

Query: 220 SYSTNSVSGSSAGLMSLKGGYTGHIYLKSIQRRPVPPVKWPSSTPLTT 363
           S ST+S S SS+G ++   G+T  +  K    +PVP      S+ L++
Sbjct: 54  SSSTSSFSSSSSGSVTGHAGHTPPVTRKPDSVQPVPSASKSKSSNLSS 101


>At2g38490.1 68415.m04728 CBL-interacting protein kinase 22,
           putative (CIPK22) identical to CBL-interacting protein
           kinase 22 [Arabidopsis thaliana] gi|17902248|gb|AAL47845
          Length = 455

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -2

Query: 503 DFLCQNHCNSFVLPESTMLSLVKFNKLSVQL 411
           +F+  +HC+ FV  EST + + K  +++ QL
Sbjct: 352 NFVTPDHCDQFVSDESTAVIMRKVEEVAKQL 382


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,636,298
Number of Sequences: 28952
Number of extensions: 266699
Number of successful extensions: 759
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)