Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I05
(580 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 59 3e-09
01_01_1152 + 9170628-9171899 54 8e-08
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 44 9e-05
11_01_0771 + 6453130-6454488 43 2e-04
11_01_0767 + 6438648-6438809,6439146-6440000 41 6e-04
11_01_0750 - 6315126-6315896,6316371-6316784 41 6e-04
11_02_0011 - 7337618-7338496,7338596-7338991 41 8e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 40 0.001
11_02_0012 - 7346282-7347136,7347234-7347593 37 0.010
11_02_0014 - 7352619-7352918,7353173-7353418 36 0.023
03_05_0294 + 22855503-22855946,22856346-22856399 32 0.29
05_06_0044 - 25150322-25151260 31 0.50
09_02_0338 + 7426999-7428322,7428390-7428646 29 2.0
03_02_0377 - 7898075-7898605,7900782-7901000,7901079-7901142,790... 29 2.0
10_08_1040 + 22503641-22503681,22503838-22504299,22506952-225073... 29 2.7
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 29 3.5
02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091 29 3.5
10_08_0960 - 21853010-21853282,21854078-21854449,21854555-218548... 28 4.7
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 28 4.7
03_06_0584 + 34909800-34910261 28 6.2
10_01_0007 - 79867-79950,80258-80303,80409-80641,80765-80836,811... 27 8.2
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 58.8 bits (136), Expect = 3e-09
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 10/170 (5%)
Frame = +1
Query: 100 DKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLG--NGDYSGVANPYISLSKTFSEMNP 273
DKN+ SPL + + L AGA + +I FLG G +++L + P
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 274 D------YFTMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDT-KKAADIINQRAN 429
AN ++V L + + +Y++E + F D ++A IN+
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 430 EKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFHV 579
T G IK + D +D A L N ++F+G W F+A T + F++
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYL 200
>01_01_1152 + 9170628-9171899
Length = 423
Score = 54.0 bits (124), Expect = 8e-08
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 3/162 (1%)
Frame = +1
Query: 103 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGV-ANPYISLSKTFSEMNPDY 279
+N + SPL + L GA ++ E+ FLG+ + + +P L +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 280 FTMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFS-DTKKAADIINQRANEKTRGHIK 453
F ++V L +F +Y + E DF+ ++A + +N ++ T G I+
Sbjct: 119 FACG--VWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 454 SPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFHV 579
+ +++D + L N + F+G W +PF+ S T FH+
Sbjct: 177 DVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHL 218
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +1
Query: 370 ETIDFSDTKKAADI---INQRANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVP 540
E I + KAA++ +N + T G IK + ++D L N ++F+G W
Sbjct: 200 EPITHWTSGKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEK 259
Query: 541 FNASETKEKDFHV 579
F+AS+TK+ +FH+
Sbjct: 260 FDASKTKDGEFHL 272
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/92 (21%), Positives = 42/92 (45%)
Frame = +1
Query: 304 VGNKYTLDEKFTITVRQYQSEVETIDFSDTKKAADIINQRANEKTRGHIKSPISDDTIDP 483
+ + D F +++ + V + +N + T G IK+ + +I+
Sbjct: 433 IAEDFVADHPFLFLIQEDMTGVVLFVGHVAAEVLGQVNSWVDRVTSGLIKNIATPRSINH 492
Query: 484 NAAAALFNVIFFQGHWHVPFNASETKEKDFHV 579
N L N ++F+G W F+ S+T++ +FH+
Sbjct: 493 NTKLVLANALYFKGAWAEKFDVSKTEDGEFHL 524
Score = 33.5 bits (73), Expect = 0.12
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Frame = +1
Query: 103 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGN-GDYSGV---ANPYISL-SKTFSEM 267
+NV SPL + + + L AGAG +R ++ LG G G+ A + L S
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGA 94
Query: 268 NPDYFTMANKIYVGNKYTLDEKF-TITVRQYQSEVETIDF 384
A+ ++V +L + F + V +Y++E ++DF
Sbjct: 95 GGPRVAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDF 134
>11_01_0771 + 6453130-6454488
Length = 452
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1
Query: 394 KKAADIINQRANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 573
++A IN A T I + ++ P A L N I+F+G W PFN S+T+ K F
Sbjct: 171 EEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPF 230
Query: 574 H 576
+
Sbjct: 231 Y 231
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 346 VRQYQSEVETIDFSDTK-KAADIINQRANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQ 522
V Y+ T+DF + +A IN T+ I I ++ + + N I+F+
Sbjct: 39 VGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFK 98
Query: 523 GHWHVPFNASETKEKDF 573
G W PF+ S+T E++F
Sbjct: 99 GEWLAPFDKSDTAEREF 115
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 41.1 bits (92), Expect = 6e-04
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
Frame = +1
Query: 112 VSSPLGVMMLMLLYKAGAGEGSRAEIDKFLG--NGDYSGVANPYISLSKTFSEMNPDYFT 285
VS+P V + + L GA +R ++ + LG G G A+ S+ + D T
Sbjct: 36 VSAP-AVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDRST 94
Query: 286 -------MANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDTKK-AADIINQRANEKT 438
A ++ +L +F + Y S + DF + + A D IN + T
Sbjct: 95 SGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDST 154
Query: 439 RGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFH 576
+G + + + TID N L + ++F+G W + T E+ F+
Sbjct: 155 KGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFY 200
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 40.7 bits (91), Expect = 8e-04
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 9/170 (5%)
Frame = +1
Query: 94 SKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY-----ISLSKTF 258
S +KN+V SP + + L AGA + E+ LG + + L+
Sbjct: 28 SSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADES 87
Query: 259 SEMNPDYFTMANKIYVGNKYTLDEK---FTITVRQYQSEVETIDFS-DTKKAADIINQRA 426
+ P +++ V + TL+ K Y++ +F K++ IN+
Sbjct: 88 ASGGP---RVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWV 144
Query: 427 NEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFH 576
++ T I + D ++ + A L N I+F+G W PF S T FH
Sbjct: 145 SKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFH 194
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 397 KAADIINQRANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFH 576
+ A +N + T G IK + ++D L N ++F+G W F+AS+TK+ +F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 577 V 579
+
Sbjct: 64 L 64
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 394 KKAADIINQRANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 573
K + IN+ ++ T I+ + D ++ A L N I+F+G W PF T F
Sbjct: 122 KSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKF 181
Query: 574 H 576
H
Sbjct: 182 H 182
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 388 DTKKAADIINQRANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEK 567
+ KK+ IN+ ++ T I + D ++ L N I+F+G W PF T
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTG 141
Query: 568 DFH 576
FH
Sbjct: 142 KFH 144
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 32.3 bits (70), Expect = 0.29
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Frame = +1
Query: 106 NVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFL---GNGDYSGV---ANPYISL-SKTFSE 264
NV SPL + + + L AGAG +R ++ L G G G+ A + L S
Sbjct: 45 NVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLADSSP 104
Query: 265 MNPDYFTMANKIYVGNKYTLDEKF-TITVRQYQSEVETIDFSDTKKAAD 408
A+ +++ + +L + F + V +Y++E ++DF TK D
Sbjct: 105 AGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDF-QTKVLRD 152
>05_06_0044 - 25150322-25151260
Length = 312
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 484 NAAAALFNVIFFQGHWHVPFNASETKEKDFHV 579
+A+ L N ++F +W PF T+E DFHV
Sbjct: 75 SASVFLANSLYFNAYWDHPFFPHLTEEGDFHV 106
>09_02_0338 + 7426999-7428322,7428390-7428646
Length = 526
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -1
Query: 181 HDYLHRRQLCTEALASSRLMVKTQHSCPSMMYTFP 77
H+YLH+ + E + +SRLMV+ +C ++ + P
Sbjct: 379 HNYLHKERNDLERIYNSRLMVQHTRNCVTLPHRNP 413
>03_02_0377 -
7898075-7898605,7900782-7901000,7901079-7901142,
7901226-7901282,7901373-7901471,7901744-7901793,
7902378-7902422,7902967-7903062
Length = 386
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = -3
Query: 179 RLPSPAPALYRSISIITPNGEDTTFLSFDDVYVSLRNCKEVLSMASPKAVLLYSWSE 9
R+P P P L+ ++S+I L+F Y + C + + + P+ L W +
Sbjct: 40 RIPLPGPPLFYNVSLIMSRRSRCVLLAFGYAYPAY-ECYKTVELNKPEIEQLIFWCQ 95
>10_08_1040 +
22503641-22503681,22503838-22504299,22506952-22507361,
22507484-22507640,22507718-22507937,22508053-22508106,
22508193-22508272,22508359-22508636,22509193-22509515,
22509590-22509853,22510453-22510860
Length = 898
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 214 NLHCLKTCRSPHDYLHRRQLCTEALASSRLMVKTQHSCPSMMYTF 80
NL+ +C H + RRQL T+ SS + +S PS Y+F
Sbjct: 799 NLNSSSSCGEEHWRMKRRQLETQQDESSYSAKQKSYSYPSTSYSF 843
>12_01_1080 + 11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 28.7 bits (61), Expect = 3.5
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Frame = +1
Query: 124 LGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIY 303
L +M+ L Y AG G + +G+ SG ++ + + + TM N
Sbjct: 643 LELMLTKLRYAAGEGNSESS-------SGEISGSSSGKMDATHGLQIIGMSA-TMPNVAA 694
Query: 304 VGNKYTLDEKFTITVRQYQSEVETIDFSDTKKAADIINQRANEKTRGHIKSPISD-DTID 480
V + DE+FT YQ+E + + K + + + R + ++D D
Sbjct: 695 VADWLQKDEEFTAQAALYQTEFRPVPLEEFIKVGNQVFDKDMNVVR--VLPKVADLGGKD 752
Query: 481 PNAAAALFNVIFFQGH 528
P+ L N + QGH
Sbjct: 753 PDHIVELCNEVVQQGH 768
>02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091
Length = 889
Score = 28.7 bits (61), Expect = 3.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 253 FYLS*CTDWQPRYNLHCLKTC 191
+ L CTD+ P+Y HC +C
Sbjct: 296 YLLDGCTDYNPKYKEHCSTSC 316
>10_08_0960 -
21853010-21853282,21854078-21854449,21854555-21854862,
21854946-21855102
Length = 369
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 424 ANEKTRGHIKSPISDDTIDPNAAAA 498
A + RG KSP DD I+PNAAAA
Sbjct: 241 AAAQARGS-KSPEDDDNINPNAAAA 264
>08_02_0095 -
12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/85 (20%), Positives = 37/85 (43%)
Frame = -2
Query: 504 EERGSCIRIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNFALVLTDSDREFLI 325
EE G CI R R+NM + + + +C FG A + + F + +F +
Sbjct: 625 EEYGDCISFDTTYRTNRYNMPFAPFVGVIGHGTTCLFGCAFLEA-EFESLWPQMIEKFNL 683
Query: 324 QSIFISDVDFIGHSEVIRIHLRERF 250
Q++ + + ++ + ++ + F
Sbjct: 684 QNVNYLKIMWKNRAQFVPVYFKYDF 708
>03_06_0584 + 34909800-34910261
Length = 153
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 203 PKNLSISARLPSPAPALYRSISIITPNGEDTTFLSFDDVYV 81
P + S +L A A Y+ + +ITP G++ F + DD Y+
Sbjct: 42 PSLKASSKKLDVSAMATYK-VKLITPEGQEHEFEAPDDTYI 81
>10_01_0007 -
79867-79950,80258-80303,80409-80641,80765-80836,
81135-81230,81506-81607,81684-82349
Length = 432
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 175 SRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYV-GNKYT 321
S A+ D GD V + + L+ F E++PD+ ++N +Y+ G+ Y+
Sbjct: 152 SYADTDAGFRTGDTIAVHHILVFLNNWFQEVHPDF--LSNPLYIAGDSYS 199
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.131 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,691,343
Number of Sequences: 37544
Number of extensions: 328023
Number of successful extensions: 718
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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