Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I05
(580 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 51 8e-07
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 48 6e-06
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 46 2e-05
SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94) 33 0.22
SB_18241| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_22514| Best HMM Match : Drf_FH1 (HMM E-Value=1.8) 29 2.7
SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2) 28 4.8
SB_1509| Best HMM Match : SRR (HMM E-Value=0.22) 28 4.8
SB_52728| Best HMM Match : Herpes_UL3 (HMM E-Value=1.7) 28 6.3
SB_51901| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_45138| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-16) 27 8.4
SB_40232| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-16) 27 8.4
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/159 (20%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Frame = +1
Query: 106 NVVSSPLGVMMLMLLYKAGAGEGSRAEIDK-FLGNGDYSGVANPYISLSKTFSEMNPDYF 282
N+ SP +++ + + GA + ++ K F D + ++ S + +
Sbjct: 29 NLFYSPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNA-SNSDGNQI 87
Query: 283 TMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDF-SDTKKAADIINQRANEKTRGHIKS 456
MAN+++ + + E+F ++ + +E+ +D+ ++ A D +N+ +KT+ IK+
Sbjct: 88 LMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKN 147
Query: 457 PISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 573
I + + + L N ++F+G W FN + T+ F
Sbjct: 148 LIPEGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKF 186
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +1
Query: 283 TMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDF-SDTKKAADIINQRANEKTRGHIKS 456
++AN +++ +++ ++FT I + Y +++ +D+ +D + A +NQ E+T+ I
Sbjct: 51 SIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKICD 110
Query: 457 PISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 573
I+ + L N I+F+G W PF + +F
Sbjct: 111 LIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEF 149
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = +1
Query: 259 SEMNPDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTK-KAADIINQRANE 432
S++ + NKI+ +++ + E+F R+ Y SE+ +DF + A +N ++
Sbjct: 48 SDLGYGEIQLVNKIWGHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQ 107
Query: 433 KTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFHV 579
+T+G+IK I I+ + N ++F+G W F T F V
Sbjct: 108 QTKGNIKELIPHGVINSLTRLIIVNAVYFKGVWKKEFGEENTFHAAFFV 156
>SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94)
Length = 1047
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 268 NPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEV-ETIDFSDTKKAADIINQRANEKTRG 444
+PD + +K T D + + + +SEV E DFS K D + + +EK R
Sbjct: 102 DPDVMERILTERIHDKLTSDSELEPLLNELKSEVAEDYDFSVRKAIVDYVLKDPSEKNRL 161
Query: 445 HIKS 456
HIKS
Sbjct: 162 HIKS 165
>SB_18241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -2
Query: 495 GSCIRIYGVIRDWRF-NMSSGLLISPLINDVS 403
GSC+ GV R W+F +++ G L+S L N V+
Sbjct: 3 GSCLWKLGVFRAWKFGSVNDGFLLSGLSNQVA 34
>SB_22514| Best HMM Match : Drf_FH1 (HMM E-Value=1.8)
Length = 336
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -3
Query: 209 PLPKNLSISARLPSPAPALYRSISIITPNGEDTTFLSFDDVYVSL 75
PLP + + + PS +PA Y S + +T G +TF D+ ++SL
Sbjct: 235 PLPTSATPTGTTPSVSPATYSSPTPVTIQG--STFTFDDNAFLSL 277
>SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2)
Length = 468
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 211 DYSGVANPYISLSKTFSEMNPDYFTMA-NKIYVGNKY-TLDEKFTITVRQY 357
+YS ++ Y++LSK +S ++ +Y T++ N + Y TL + + + Y
Sbjct: 19 NYSTLSRNYLTLSKNYSTLSKNYLTLSKNYSTLSKNYLTLSKNYLTLSKNY 69
>SB_1509| Best HMM Match : SRR (HMM E-Value=0.22)
Length = 644
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 211 DYSGVANPYISLSKTFSEMNPDYFTMA-NKIYVGNKY-TLDEKFTITVRQY 357
+YS ++ Y++LSK +S ++ +Y T++ N + Y TL + + + Y
Sbjct: 19 NYSTLSRNYLTLSKNYSTLSKNYLTLSKNYSTLSKNYLTLSKNYLTLSKNY 69
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/50 (28%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +1
Query: 211 DYSGVANPYISLSKTFSEMNPDYFTMA-NKIYVGNKY-TLDEKF-TITVR 351
+YS ++ Y++LSK +S ++ +Y T++ N + Y TL + + T++++
Sbjct: 112 NYSTLSKNYLTLSKNYSTLSKNYLTLSKNYSTLSKNYLTLSKNYLTLSIK 161
>SB_52728| Best HMM Match : Herpes_UL3 (HMM E-Value=1.7)
Length = 398
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +1
Query: 319 TLDEKFTITVRQYQSEVETIDFSDTKKAADIINQRANEKTRGHIKSPISDDTIDPNAA 492
T D + T+T ++ +S ++ + + + +NQR ++R P S T P ++
Sbjct: 188 TADSRCTLTRQRPKSSLDRMQIERKSELVEFMNQRTKRQSRPSTAPPCSPRTSIPRSS 245
>SB_51901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 27.5 bits (58), Expect = 8.4
Identities = 22/95 (23%), Positives = 33/95 (34%)
Frame = +1
Query: 154 KAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEK 333
K G G G E+ + N + L S N +K+Y+ + +D
Sbjct: 120 KHGFGYGKNGEVILVMPNERLNIKKIMVFELFSVLSGYNFLRILKVDKVYLKKLFLMDNA 179
Query: 334 FTITVRQYQSEVETIDFSDTKKAADIINQRANEKT 438
F+ + S VET F + N AN T
Sbjct: 180 FSTVPGEANSNVETQSFIEASVETFTENMLANHAT 214
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -1
Query: 214 NLHCLKTCRSPHDYLHRRQLCTEALASSRLMVKTQHSCPSMMYTFP*ETAKK 59
N C +TCR+P +Y +LC S K ++ P F AKK
Sbjct: 620 NAQCRQTCRTPPNY---AELCGSLWISRITRKKPNYALPHKRVAFSNSQAKK 668
>SB_45138| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-16)
Length = 126
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +1
Query: 412 INQRANEKTR--GHIKSPISDDTIDPNAAAALFNVIFFQGH-W--HVPFNA-SETKEK 567
IN+RA T+ GH+K+ +S T NA+ + +GH W H+ +A + T EK
Sbjct: 8 INRRAKNSTKANGHVKTEVSSLTSVVNASVIQDIATYIEGHIWARHLKTHALTHTGEK 65
>SB_40232| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-16)
Length = 126
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +1
Query: 412 INQRANEKTR--GHIKSPISDDTIDPNAAAALFNVIFFQGH-W--HVPFNA-SETKEK 567
IN+RA T+ GH+K+ +S T NA+ + +GH W H+ +A + T EK
Sbjct: 8 INRRAKNSTKANGHVKTEVSSLTSVVNASVIQDIATYIEGHIWARHLKTHALTHTGEK 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.131 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,848,663
Number of Sequences: 59808
Number of extensions: 362968
Number of successful extensions: 791
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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