Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I05
(580 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 60 1e-09
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 58 3e-09
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 56 2e-08
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 52 3e-07
At1g64030.1 68414.m07252 serpin family protein / serine protease... 50 1e-06
At2g35580.1 68415.m04357 serpin family protein / serine protease... 41 5e-04
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 36 0.015
At2g14540.1 68415.m01628 serpin family protein / serine protease... 33 0.18
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 33 0.18
At3g02280.1 68416.m00209 flavodoxin family protein low similarit... 30 1.3
At1g70900.1 68414.m08181 expressed protein 29 3.0
At1g23110.1 68414.m02889 hypothetical protein 29 3.0
At5g19010.1 68418.m02258 mitogen-activated protein kinase, putat... 28 5.2
At5g14950.1 68418.m01754 glycosyl hydrolase family 38 protein si... 28 5.2
At4g01290.1 68417.m00170 expressed protein 28 5.2
At3g25140.1 68416.m03139 glycosyl transferase family 8 protein c... 28 5.2
At5g35940.1 68418.m04325 jacalin lectin family protein similar t... 27 6.8
At3g55340.1 68416.m06146 RNA recognition motif (RRM)-containing ... 27 6.8
At2g20170.1 68415.m02358 hypothetical protein and grail contain... 27 6.8
At1g76740.1 68414.m08931 expressed protein weak similarity to fi... 27 6.8
At1g66020.1 68414.m07493 terpene synthase/cyclase family protein... 27 6.8
At5g59920.1 68418.m07514 DC1 domain-containing protein contains ... 27 9.0
At3g13170.1 68416.m01647 DNA topoisomerase VIA (SPO11-1) identic... 27 9.0
At2g23990.2 68415.m02866 plastocyanin-like domain-containing pro... 27 9.0
At2g23990.1 68415.m02865 plastocyanin-like domain-containing pro... 27 9.0
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 59.7 bits (138), Expect = 1e-09
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Frame = +1
Query: 88 TSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKF--LGNGDY-SGVANPYISLSKTF 258
T + N+V SP+ + +L+ L AG+ ++ +I F L + DY + V +S++
Sbjct: 24 TVANGSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLAKTVSVALND 83
Query: 259 SEMNPD-YFTMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDTKKAADI--INQRA 426
D + + A +++ + F + Y + +DF+ TK A I +N A
Sbjct: 84 GMERSDLHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFA-TKPAEVINEVNAWA 142
Query: 427 NEKTRGHIKSPISDDTIDP--NAAAALFNVIFFQGHWHVPFNASETKEKDFHV 579
T G IK +SDD+I + L N ++F+G W F+A TK DFH+
Sbjct: 143 EVHTNGLIKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHL 195
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 58.4 bits (135), Expect = 3e-09
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 7/165 (4%)
Frame = +1
Query: 106 NVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFT 285
NVV SP+ + +L+ L AG+ ++ EI FL + + ++ +E + +
Sbjct: 31 NVVFSPMSINVLLSLIAAGSNPVTKEEILSFLMSPSTDHLNAVLAKIADGGTERSDLCLS 90
Query: 286 MANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDTK-KAADIINQRANEKTRGHIKSP 459
A+ +++ L F + Y++ +DF+ + D +N A+ T G IK
Sbjct: 91 TAHGVWIDKSSYLKPSFKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTNGLIKQI 150
Query: 460 ISDDTIDP-----NAAAALFNVIFFQGHWHVPFNASETKEKDFHV 579
+S D D N+ L N ++F+ W F+A TK+ DFH+
Sbjct: 151 LSRDCTDTIKEIRNSTLILANAVYFKAAWSRKFDAKLTKDNDFHL 195
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 55.6 bits (128), Expect = 2e-08
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = +1
Query: 283 TMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDF-SDTKKAADIINQRANEKTRGHIKS 456
++AN +++ ++L F + Y++ +DF S + D +N A T G IK
Sbjct: 28 SIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGLIKQ 87
Query: 457 PISDDTIDP--NAAAALFNVIFFQGHWHVPFNASETKEKDFHV 579
+S D+ID ++ L N ++F+G W F+A+ TK+ DFH+
Sbjct: 88 ILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKNDFHL 130
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 52.0 bits (119), Expect = 3e-07
Identities = 40/185 (21%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Frame = +1
Query: 52 DKTSLQFLKETYTS-SKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFL---GNGDYS 219
++ S+ K T+ S++ NV+ SP + +++ + AG+ ++ +I FL +
Sbjct: 11 NQVSMNLAKHVITTVSQNSNVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLN 70
Query: 220 GVANPYISLSKTFSEMNPD-YFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDT 393
++ +S N ++AN ++ + F + Y++ DF
Sbjct: 71 SFSSEIVSAVLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQS- 129
Query: 394 KKAADII---NQRANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKE 564
KA ++I N A ++T G I + + + D N ++F+G W+ F+ S T+E
Sbjct: 130 -KAVEVIAEVNSWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQE 188
Query: 565 KDFHV 579
+FH+
Sbjct: 189 GEFHL 193
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 50.0 bits (114), Expect = 1e-06
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 7/171 (4%)
Frame = +1
Query: 88 TSSKDKNVVSSPLGVMMLMLLYKAG-AGEGSRAEIDKFLGNGDYSGVANPYISLSKTF-- 258
++ KD NV+ SP + + ++ AG G+ +I FL + + + L+
Sbjct: 24 SAPKDSNVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVFRELASVVYA 83
Query: 259 --SEMNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVET-IDF-SDTKKAADIINQRA 426
S T AN +++ D KF + V +DF S+ ++ +N
Sbjct: 84 DRSATGGPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWV 143
Query: 427 NEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFHV 579
T IK + D ++ N + F+G W PF T++ DF++
Sbjct: 144 EHHTNNLIKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYL 194
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 41.1 bits (92), Expect = 5e-04
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Frame = +1
Query: 289 ANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDTKKAADIINQRAN----EKTRGHIK 453
AN +++ ++ F + + Y++ +DF TK AD +N+ N ++T G I
Sbjct: 95 ANGLWIEKTLNVEPSFKDLLLNSYKAAFNRVDFR-TK--ADEVNREVNSWVEKQTNGLIT 151
Query: 454 SPISDDTIDPNAAAALF-NVIFFQGHWHVPFNASETKEKDFHV 579
+ + + +F N +FF G W F+ S TK+ DFH+
Sbjct: 152 NLLPSNPKSAPLTDHIFANALFFNGRWDSQFDPSLTKDSDFHL 194
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 36.3 bits (80), Expect = 0.015
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 412 INQRANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFH 576
+N+ A++ T G I + ++ N ++F+G W F+ S TK+ +FH
Sbjct: 16 LNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFH 70
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 355 YQSEVETIDFSDTKKAADI-INQRANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHW 531
+++ +DF + + +N A+ T IK + ++ N ++F+G W
Sbjct: 147 FKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAW 206
Query: 532 HVPFNASETKEKDFHV 579
F+ S T++K FH+
Sbjct: 207 EKAFDKSMTRDKPFHL 222
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 412 INQRANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFHV 579
+N A T G IK+ + ++ N ++F+G W F S T K FH+
Sbjct: 39 VNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMTIHKPFHL 94
>At3g02280.1 68416.m00209 flavodoxin family protein low similarity
to SP|Q05001 NADPH-cytochrome P450 reductase (EC
1.6.2.4) {Catharanthus roseus}, similar to
NADPH-dependent FMN and FAD containing oxidoreductase
[Homo sapiens] GI:6694369; contains Pfam profiles
PF00258: flavodoxin, PF00667: FAD binding domain,
PF00175: Oxidoreductase NAD-binding domain
Length = 623
Score = 29.9 bits (64), Expect = 1.3
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +1
Query: 172 GSRAEIDKFLGNGD----YSGVANPY-ISLSKTFSEMNPDYFTMANKIYVGNKYTLDE-K 333
G+ I+K LG+ Y G +P+ +SL +T ++NP YF + + +D+ K
Sbjct: 123 GATTIIEKGLGDDQHPSGYEGTLDPWMLSLWRTLYQINPKYFPKGPDVKIPQDEVIDKPK 182
Query: 334 FTITVRQYQSEVETIDFSDTKKAADIINQRANEKTRGHI 450
+ I + Q ++E SD +DII QRA + G +
Sbjct: 183 YRILFHK-QEKLEPKLLSD----SDII-QRARGMSPGKL 215
>At1g70900.1 68414.m08181 expressed protein
Length = 244
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 103 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYF 282
K +S +GV + LY + SR + K+L DY+ +A I L++ E NP +
Sbjct: 103 KVYANSLIGVGIASSLYHS-----SRGKFRKYLRWADYTMIATATICLTRALREENPKFL 157
Query: 283 TMANKI 300
A+ +
Sbjct: 158 MAASAL 163
>At1g23110.1 68414.m02889 hypothetical protein
Length = 261
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +1
Query: 103 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYF 282
K +S +GV + LY A SR ++ K+L DY+ +A I LS+ NP +
Sbjct: 120 KVYANSLIGVGIASSLYHA-----SRGKLRKYLRWVDYTMIATTTICLSRALRNENPKFL 174
Query: 283 TMANKI 300
A+ +
Sbjct: 175 MAASAL 180
>At5g19010.1 68418.m02258 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK16) mitogen-activated protein
kinase (MAPK)(AtMPK16), PMID:12119167; similar to
ATMPK9, Arabidopsis thaliana, EMBL:AB038694
Length = 567
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 166 GEGSRAEIDKFLGNGDYSGVANPY 237
GEGSR I++ +G G Y V + Y
Sbjct: 20 GEGSRYRIEEVIGKGSYGVVCSAY 43
>At5g14950.1 68418.m01754 glycosyl hydrolase family 38 protein
similar to alpha-mannosidase II SP:P27046 from [Mus
musculus]
Length = 1173
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 155 LYRSISIITPNGEDTTFLSFDDVYVSLRN 69
LYR+ +++ P G+D ++S D+ RN
Sbjct: 401 LYRTNTLLIPLGDDFRYISIDEAEAQFRN 429
>At4g01290.1 68417.m00170 expressed protein
Length = 991
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 290 PIKSTSEINILWMRNSRSLSVSTKAKLKLLT----SAIPKKQLTSLISGLMRRP 439
P+ + + + M R SV +A LL+ S+ PK Q T L+S RRP
Sbjct: 584 PVDQDTSVPSVKMTKQRKTSVDDQASQHLLSLLQRSSDPKSQDTQLLSATERRP 637
>At3g25140.1 68416.m03139 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 559
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +1
Query: 106 NVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFT 285
+VV+ + + + +++K +G+ E+ DY+ + + Y+ + K N F
Sbjct: 281 HVVTDKMNLGAMQVMFKLKEYKGAHVEVKAV---EDYTFLNSSYVPVLKQLESANLQKFY 337
Query: 286 MANKIYVGNKYTLDEKF 336
NK+ K T + KF
Sbjct: 338 FENKLENATKDTTNMKF 354
>At5g35940.1 68418.m04325 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 444
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 100 DKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKT-FSEMNPD 276
DKNV S LG + +L +G + + GDY G+ Y++ T M D
Sbjct: 131 DKNVYS--LGAYFIKVLATKSGMQGGQNTGKSYDYGGDYDGIRKVYVTYDGTSIRHMRVD 188
Query: 277 Y 279
Y
Sbjct: 189 Y 189
>At3g55340.1 68416.m06146 RNA recognition motif (RRM)-containing
protein low similarity to nucleolar phosphoprotein
(Nopp52), Tetrahymena thermophila, EMBL:TT51555;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 597
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 190 DKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGN 312
D++L Y P I KT S P+ N++Y+GN
Sbjct: 228 DRYLTIQQYVKTTTPSIPRRKTSSGFAPEMVDGYNRVYIGN 268
>At2g20170.1 68415.m02358 hypothetical protein and grail contains
Pfam profile PF03080: Arabidopsis proteins of unknown
function
Length = 401
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 28 RTALGDAIDKTSLQFLKETYTSSKDKNVVS 117
RT L D I L++L YT+SKDK+ ++
Sbjct: 121 RTTLEDLIQIQRLKYLGVKYTTSKDKDFLN 150
>At1g76740.1 68414.m08931 expressed protein weak similarity to
fimbriae-associated protein Fap1 (GI:3929312)
[Streptococcus parasanguinis]; weak similarity to 1MDa_1
protein (GI:24620455) [Caenorhabditis elegans]
Length = 1532
Score = 27.5 bits (58), Expect = 6.8
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +1
Query: 142 MLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY-ISLSKTFSEMNPDYFTMANKIYVGNKY 318
+LL +G G E G D A P I+ K S + PD T+ N + N+
Sbjct: 1383 LLLNSSGGGSNVSGETSILAGTADEDEAAGPIAIAFVKAMS-LTPDELTVKNHM---NEK 1438
Query: 319 TLDEKFTITVRQYQSEVETI-DFSDTKKAADIINQRA 426
DE+ IT ETI + S+ +K I++ A
Sbjct: 1439 AADEEM-ITRETTPIPEETINESSENRKEYSSIDESA 1474
>At1g66020.1 68414.m07493 terpene synthase/cyclase family protein
contains Pfam profile: PF01397: Terpene synthase family
Length = 598
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/79 (25%), Positives = 32/79 (40%)
Frame = +1
Query: 301 YVGNKYTLDEKFTITVRQYQSEVETIDFSDTKKAADIINQRANEKTRGHIKSPISDDTID 480
+ G+ E T + S E TK D I Q A T H++S + T
Sbjct: 176 FKGSNGNFKESLTGYAKGMLSLYEAAHLGTTK---DYILQEALSFTSSHLESLAACGTCP 232
Query: 481 PNAAAALFNVIFFQGHWHV 537
P+ + + NV+ HW++
Sbjct: 233 PHLSVHIQNVLSVPQHWNM 251
>At5g59920.1 68418.m07514 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 21 VQQDSLRRCH*QNFFAVS*GNVYIIEGQECCVFTIRRDDAN 143
V D RRC V G++Y+ E +ECC F + AN
Sbjct: 384 VIHDERRRCE-ACIHPVQFGSIYVCEEEECC-FVLHEKCAN 422
>At3g13170.1 68416.m01647 DNA topoisomerase VIA (SPO11-1) identical
to AtSPO11-1 [Arabidopsis thaliana] GI:13383478;
contains Pfam profile PF04406: Type IIB DNA
topoisomerase; identical to cDNA putative topoisomerase
VIA (SPO11 gene 1) GI:7270974
Length = 362
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 43 DAIDKTSLQFLKETYTSSKDKNVVSSP 123
+A+ SL FL E Y SK + VSSP
Sbjct: 336 EALSVHSLSFLSEVYIPSKIRREVSSP 362
>At2g23990.2 68415.m02866 plastocyanin-like domain-containing
protein
Length = 226
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 212 SPLPKNLSISARLPSPAPALYRSISIITPNG 120
+P PK+ S S P+PAPA ++ ++ NG
Sbjct: 181 TPSPKS-STSTMAPAPAPAKSSAVGLVAGNG 210
>At2g23990.1 68415.m02865 plastocyanin-like domain-containing
protein
Length = 207
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 212 SPLPKNLSISARLPSPAPALYRSISIITPNG 120
+P PK+ S S P+PAPA ++ ++ NG
Sbjct: 162 TPSPKS-STSTMAPAPAPAKSSAVGLVAGNG 191
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.131 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,626,563
Number of Sequences: 28952
Number of extensions: 263129
Number of successful extensions: 654
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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