Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I03
         (513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   1.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.5  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 483 GSVALRHDTRKRVSITWLVKL 421
           GSVA+ H  +KR+ I  +V L
Sbjct: 2   GSVAINHSLKKRLKIITIVIL 22


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 338 VPLHGTQADYQPHLTPHP 285
           +P H   + + PHL+ HP
Sbjct: 230 IPPHPGLSPHPPHLSSHP 247


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 338 VPLHGTQADYQPHLTPHP 285
           +P H   + + PHL+ HP
Sbjct: 122 IPPHPGLSPHPPHLSSHP 139


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = -1

Query: 456 RKRVSITWLVKLSEHNLRNSGDNASMKRSRSSGEAYGKRSSTTRHPS*LPTT 301
           R+R+ I   + LSE  ++    N  MK  + +     K      +P+ + TT
Sbjct: 261 RRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRRKTNPAGVTTT 312


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 419  QNTTCVTPGTMHL*NVPGL 363
            Q   C+ PG ++L ++P +
Sbjct: 1024 QEFWCIVPGIIYLLSIPSM 1042


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 419  QNTTCVTPGTMHL*NVPGL 363
            Q   C+ PG ++L ++P +
Sbjct: 1024 QEFWCIVPGIIYLLSIPSM 1042


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 419  QNTTCVTPGTMHL*NVPGL 363
            Q   C+ PG ++L ++P +
Sbjct: 1024 QEFWCIVPGIIYLLSIPSM 1042


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 419  QNTTCVTPGTMHL*NVPGL 363
            Q   C+ PG ++L ++P +
Sbjct: 1024 QEFWCIVPGIIYLLSIPSM 1042


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = -1

Query: 456 RKRVSITWLVKLSEHNLRNSGDNASMKRSRSSGEAYGKRSSTTRHPS*LPTT 301
           R+R+ I   + LSE  ++    N  MK  + +     K      +P+ + TT
Sbjct: 261 RRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRRKTNPAGVTTT 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,306
Number of Sequences: 336
Number of extensions: 2832
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)