Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I03
(513 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0189 - 21039217-21039348,21039480-21039738,21039841-210400... 37 0.008
10_07_0055 - 12424320-12424899,12424978-12425160,12425810-124259... 35 0.033
04_01_0522 - 6865049-6865131,6865214-6865388,6865692-6865877,686... 34 0.058
12_02_0858 + 23740589-23743233,23743362-23743503,23744778-237449... 33 0.10
03_05_0001 - 19386264-19386284,19386446-19386517,19386614-193873... 33 0.18
09_03_0001 - 11373469-11373862,11374072-11374264,11374414-113744... 31 0.72
07_01_0021 - 133549-133628,133780-133824,133850-133858,134513-13... 29 1.7
08_01_0535 - 4638954-4639127,4639894-4639944,4640287-4640352,464... 29 2.9
04_01_0009 - 178579-178638,179151-179246,179504-179565,180181-18... 27 6.7
11_02_0010 + 7322826-7323658,7324236-7324714,7325204-7326195 27 8.8
11_01_0024 + 163588-163897,164303-164406 27 8.8
04_04_1373 + 33025059-33025422,33025510-33025551,33025836-330260... 27 8.8
02_05_1240 + 35181983-35182615,35183025-35183856,35183936-351844... 27 8.8
>11_06_0189 -
21039217-21039348,21039480-21039738,21039841-21040004,
21040371-21040533,21040615-21042137
Length = 746
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 236 NDEERHVLVNNVLERTKDEELNVVGNQLGCRVVELLLPYAS-PEDLERFIDALSPELRRL 412
+D++R ++ + R E + V N G R V+ ++ + PE + + + ALSP RL
Sbjct: 481 SDDQRTRIICEIT-RVPGELITVACNMHGTRTVQKVIDTINTPEQISKVVSALSPGAMRL 539
Query: 413 CSDNFTSHVIETLLR 457
+D SHV + L+
Sbjct: 540 MTDTNGSHVAQRCLK 554
>10_07_0055 -
12424320-12424899,12424978-12425160,12425810-12425958,
12426339-12426518,12426610-12426729,12427240-12427383,
12427613-12427777,12427879-12428184,12428258-12428621,
12428746-12429074
Length = 839
Score = 35.1 bits (77), Expect = 0.033
Identities = 25/96 (26%), Positives = 42/96 (43%)
Frame = +2
Query: 170 KMSEELYQYFVGILDVIKQGIENDEERHVLVNNVLERTKDEELNVVGNQLGCRVVELLLP 349
++ E +YF+ I + + EER + N LE TK +EL + + +++L+
Sbjct: 112 RVDPETAKYFLEISYLFDNKEIDLEERATICANALEETKGKELELATDGPISHTLQVLVE 171
Query: 350 YASPEDLERFIDALSPELRRLCSDNFTSHVIETLLR 457
E L F+ + D F SHV E L+
Sbjct: 172 GCELEQLCVFLHNSIESFHIIAVDKFGSHVAEAALK 207
>04_01_0522 -
6865049-6865131,6865214-6865388,6865692-6865877,
6866489-6866599,6866678-6866890,6867446-6867553,
6867632-6867773,6867855-6868951,6871287-6871559
Length = 795
Score = 34.3 bits (75), Expect = 0.058
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = +2
Query: 188 YQYFVGILDVIKQGIENDEERHVLVNNVLERTKDEELNVVGNQLGCRVVELLLPYASPED 367
+QY ++ + + N + +++ ++ER D + GN VV+ +L + PE+
Sbjct: 603 HQYGCRVIQRVLEHCHNPATQSAVMDEIVERAFDLTEDKFGNY----VVQHVLEHGRPEE 658
Query: 368 LERFIDALSPELRRLCSDNFTSHVIETLL 454
I LS ++ L + S+V+E L
Sbjct: 659 RSSIIQKLSGQVVNLSQQKYASNVVEKCL 687
>12_02_0858 + 23740589-23743233,23743362-23743503,23744778-23744990,
23745083-23745190,23745378-23745587,23745881-23746055,
23746197-23746264
Length = 1186
Score = 33.5 bits (73), Expect = 0.10
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +2
Query: 320 GCRVVELLLPYASPEDLERFIDALSPELRRLCSDNFTSHVIETLLR 457
GCRV++ +L Y E F++ + E+ + D + ++V++ +L+
Sbjct: 995 GCRVIQRILEYFDSSIQEIFLEEIIEEVYYMAKDQYANYVVQNILQ 1040
>03_05_0001 - 19386264-19386284,19386446-19386517,19386614-19387357,
19387454-19388884,19388953-19389118,19392035-19392114,
19392393-19392462,19392550-19392761,19392837-19392890,
19393471-19393623,19393715-19393930,19394029-19394248,
19394332-19394399,19394510-19394643,19394755-19394854,
19394943-19395421,19395506-19395699,19396270-19396355,
19396364-19396444,19396842-19397023,19397305-19397346,
19398247-19398558,19399374-19399434,19399435-19399617,
19399744-19399863,19400380-19401051,19402597-19402668,
19402742-19402865,19403563-19403651,19405023-19405097
Length = 2170
Score = 32.7 bits (71), Expect = 0.18
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Frame = +2
Query: 308 GNQLGCRVVELLLPYASPEDLERFIDALSPELRRLCS--DNFTSH---VIETLLRVSCLR 472
G LGC+V + + Y PE + + L P+L RL DNF + VI+ +LR+ +R
Sbjct: 1126 GTVLGCQVEKHMNWYLHPEHVSILLVRLMPQLDRLACVIDNFATSALTVIQDMLRIFIVR 1185
Query: 473 -ATEPLQ 490
A+E ++
Sbjct: 1186 IASEKIE 1192
>09_03_0001 -
11373469-11373862,11374072-11374264,11374414-11374482,
11374858-11374984,11375223-11375485,11375697-11375785,
11375832-11375909,11376070-11376141,11376234-11376372,
11378857-11379323,11380781-11381345,11382553-11382622
Length = 841
Score = 30.7 bits (66), Expect = 0.72
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +2
Query: 206 ILDVIKQGIENDEERHVLVNNVLERTKDEELNVVGNQLGCRVVELLLPYASPEDLERFID 385
I+ +I + N V+ NN T E+LN+ GNQL + + L + + + R++
Sbjct: 408 IMRIISIDLSNSNLFGVISNNFTLLTALEKLNLSGNQLNGPIPDSLCKNNAGQFVFRYVA 467
Query: 386 ALSPEL 403
+PEL
Sbjct: 468 KTNPEL 473
>07_01_0021 -
133549-133628,133780-133824,133850-133858,134513-134656,
140098-140391,141324-141908,142034-142198,142364-142406
Length = 454
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 341 LLPYASPEDLERFIDALSPELRRLCSDNFTS-HVIETLLRVSCLRATEP-LQNV 496
L+P+ +P L F + P L CS NFT+ + T V C + P L NV
Sbjct: 48 LVPFLAPAPLAPFFNTTPPNLSGKCSLNFTAVGDLITTTAVDCFASFAPFLANV 101
>08_01_0535 -
4638954-4639127,4639894-4639944,4640287-4640352,
4640492-4640557,4640701-4640892,4641282-4641780,
4642009-4642364
Length = 467
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 408 LRNSGDNASMKRSRSSGEAYGKRSSTTRHPS*LPTTFNSSSFV 280
L GD++S+ ++ ++ + S T PS LPTTF + ++
Sbjct: 288 LEGVGDSSSIITKKAKADSTPLKKSRTGTPSPLPTTFKACVYI 330
>04_01_0009 -
178579-178638,179151-179246,179504-179565,180181-180245,
181271-181363,181489-181592,182070-182153,182223-182303,
182829-182880,183048-183119,183411-183486,183568-183680,
184056-184203,184295-184372,184511-184640,184733-184923,
187039-187099,187201-187371
Length = 578
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 206 ILDVIKQGIENDEERHVLVNNVLERTKDEELNVVGNQLGCRVVELLLP 349
IL +K G + E H + + + T ++ LN++ + GC++ E++LP
Sbjct: 380 ILGSVKIG-KYTEWFHDVSDRDISNTCEDALNLLCSSFGCQIEEIILP 426
>11_02_0010 + 7322826-7323658,7324236-7324714,7325204-7326195
Length = 767
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 242 EERHVLVNNVLERTKDEELNVVGNQLGCRVVELLLP--YASPEDL 370
EE HVLVN ER K + + CR ++ LP Y E L
Sbjct: 130 EELHVLVNEAYERQKRYRIEEGTSSKLCREIDPRLPALYVEKEKL 174
>11_01_0024 + 163588-163897,164303-164406
Length = 137
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 353 HTVKEVPLHGTQADYQPHLTPHPLFSQGHYLLGHVSPHRFL 231
HT + + L HL H HYLLGHVS H+ L
Sbjct: 20 HTSRGLVLDNGDLVDDDHLLEHDEQLHVHYLLGHVS-HKLL 59
>04_04_1373 +
33025059-33025422,33025510-33025551,33025836-33026054,
33026145-33026384,33026483-33027508,33027770-33028545
Length = 888
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 377 NVPGLLARHTVKEVPLHGTQADYQPHLTPHPLFSQGH 267
N+PG + + +KE+ L G D PH L +Q H
Sbjct: 387 NIPGWVPQFQLKELALSGCDLDKSIITEPHFLRTQHH 423
>02_05_1240 + 35181983-35182615,35183025-35183856,35183936-35184497,
35184581-35184722,35184832-35184939,35185055-35185267,
35185355-35185465,35185684-35185878,35186094-35186268,
35186379-35186413
Length = 1001
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 242 EERHVLVNNVLERTKDEE--LNVVGNQLGCRVVELLLPYASPEDLERFIDALSPELRRLC 415
EER +L+N +L T + E ++ +Q VV+ +L ++ E + + L L
Sbjct: 912 EERQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQNRELILSRIKVHLNALK 971
Query: 416 SDNFTSHVI 442
+ H++
Sbjct: 972 RYTYGKHIV 980
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,461,051
Number of Sequences: 37544
Number of extensions: 275277
Number of successful extensions: 822
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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