Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I02
         (306 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3LV18 Cluster: ADR1-like Zn finger domain protein; n=1...    33   1.7  
UniRef50_Q2K745 Cluster: Putative uncharacterized protein; n=1; ...    32   2.2  
UniRef50_Q1GQV9 Cluster: Putative uncharacterized protein precur...    32   2.9  
UniRef50_Q8N5C6 Cluster: S1 RNA-binding domain-containing protei...    31   3.8  
UniRef50_A7HC96 Cluster: GTP cyclohydrolase II; n=10; cellular o...    31   6.7  
UniRef50_Q4PDH9 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_Q0TWB5 Cluster: Predicted protein; n=1; Phaeosphaeria n...    30   8.8  

>UniRef50_A3LV18 Cluster: ADR1-like Zn finger domain protein; n=1;
           Pichia stipitis|Rep: ADR1-like Zn finger domain protein
           - Pichia stipitis (Yeast)
          Length = 1049

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 20/74 (27%), Positives = 34/74 (45%)
 Frame = +1

Query: 4   PYPVSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPNGELIQH*DYYFRNYLFN*LKLFLDP 183
           P P + SP +        SNS S +A  +     N E+  H ++ F N  F  +K+  D 
Sbjct: 750 PSPTNTSPRMSSASLVSNSNSNSNMALSAAAAIVNSEISYHENFAFNNKWFWIVKMKFDT 809

Query: 184 ITLIFCEFFKLSNN 225
           I   + +F + ++N
Sbjct: 810 IFESWLDFIRETSN 823


>UniRef50_Q2K745 Cluster: Putative uncharacterized protein; n=1;
           Rhizobium etli CFN 42|Rep: Putative uncharacterized
           protein - Rhizobium etli (strain CFN 42 / ATCC 51251)
          Length = 202

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -2

Query: 287 G*REGAAFQRGVNLARPSCK 228
           G R GAAF  GV +ARPSC+
Sbjct: 142 GRRRGAAFSEGVRMARPSCR 161


>UniRef50_Q1GQV9 Cluster: Putative uncharacterized protein
           precursor; n=1; Sphingopyxis alaskensis|Rep: Putative
           uncharacterized protein precursor - Sphingopyxis
           alaskensis (Sphingomonas alaskensis)
          Length = 499

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +1

Query: 10  PVSRSPNLPKEPRSPRSNSLSRVAHVSP 93
           PV+ SP +P+ PR+PR   LS+++  +P
Sbjct: 31  PVTSSPVVPRAPRAPRERRLSQLSRKAP 58


>UniRef50_Q8N5C6 Cluster: S1 RNA-binding domain-containing protein
           1; n=26; Euteleostomi|Rep: S1 RNA-binding
           domain-containing protein 1 - Homo sapiens (Human)
          Length = 995

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 106 WEI*KVIHEQLLIENWIAVNVVPLVNSDYATP 11
           W++ +V+ E+  IE W+  N++ L N D   P
Sbjct: 212 WDMVQVLSERTNIEPWVCANIIRLFNDDNTIP 243


>UniRef50_A7HC96 Cluster: GTP cyclohydrolase II; n=10; cellular
           organisms|Rep: GTP cyclohydrolase II - Anaeromyxobacter
           sp. Fw109-5
          Length = 218

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 21/44 (47%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 131 SQCCISSPLGNLKGDT*ATLDRELDR-GERGSFGKFGLRDTG*G 3
           S+C  S  LG+LK D  A LDR LD   ERG      LR  G G
Sbjct: 65  SECLTSEVLGSLKCDCRAQLDRALDLIAERGRGVLVYLRQEGRG 108


>UniRef50_Q4PDH9 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 501

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 18/32 (56%), Positives = 20/32 (62%)
 Frame = +1

Query: 13  VSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPN 108
           VS +P  PK PRSP SN LSR A  SP   P+
Sbjct: 80  VSLNPTSPKSPRSPASN-LSRPAR-SPLSTPS 109


>UniRef50_Q0TWB5 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 186

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 4/32 (12%)
 Frame = +1

Query: 1   RPYPV--SRSP--NLPKEPRSPRSNSLSRVAH 84
           RP P   SRS   +LP+ PR+PR+N+ SRV H
Sbjct: 153 RPAPTLPSRSTWASLPRTPRTPRTNAPSRVFH 184


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,507,806
Number of Sequences: 1657284
Number of extensions: 4491987
Number of successful extensions: 11800
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11767
length of database: 575,637,011
effective HSP length: 78
effective length of database: 446,368,859
effective search space used: 10266483757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)