Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I02
(306 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015806-1|AAH15806.1| 665|Homo sapiens SH3-domain kinase bindi... 28 4.6
AY542305-1|AAT08174.1| 665|Homo sapiens GIG10 protein. 28 4.6
AY423734-1|AAS00497.1| 665|Homo sapiens migration-inducing gene... 28 4.6
AL772197-2|CAH71710.1| 665|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL772197-1|CAH71709.1| 553|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732423-6|CAI40280.1| 645|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732423-5|CAI40278.1| 427|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732423-4|CAI40277.1| 628|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732423-3|CAI40276.1| 665|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732327-6|CAI40514.1| 645|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732327-4|CAI40512.1| 427|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732327-3|CAI40511.1| 628|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732327-2|CAI40510.1| 665|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732327-1|CAI40509.1| 553|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732325-3|CAI41254.1| 628|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732325-2|CAI41253.1| 665|Homo sapiens SH3-domain kinase bindi... 28 4.6
AL732325-1|CAI41252.1| 553|Homo sapiens SH3-domain kinase bindi... 28 4.6
AF542051-1|AAN77231.1| 628|Homo sapiens CD2 binding protein CD2... 28 4.6
AF329268-1|AAO13348.1| 404|Homo sapiens SH3-domain kinase bindi... 28 4.6
AF329267-1|AAK95587.1| 404|Homo sapiens SH3-domain kinase bindi... 28 4.6
AF230904-1|AAF37854.1| 665|Homo sapiens c-Cbl-interacting prote... 28 4.6
X87175-1|CAA60642.1| 458|Homo sapiens ER81 protein protein. 28 6.1
U17163-1|AAA79844.1| 477|Homo sapiens ETV1 protein. 28 6.1
BC106763-1|AAI06764.1| 477|Homo sapiens ets variant gene 1 prot... 28 6.1
BC106762-1|AAI06763.1| 477|Homo sapiens ets variant gene 1 prot... 28 6.1
BC098403-1|AAH98403.1| 477|Homo sapiens ets variant gene 1 prot... 28 6.1
AF109632-2|AAD29878.1| 459|Homo sapiens ets variant protein ER8... 28 6.1
AF109632-1|AAD29877.1| 477|Homo sapiens ets variant protein ETV... 28 6.1
AC004857-1|AAC62435.1| 454|Homo sapiens ETS-related transcripti... 28 6.1
M74547-1|AAA36397.1| 935|Homo sapiens p107 protein. 27 8.1
L14812-1|AAA02489.1| 1068|Homo sapiens p107 protein. 27 8.1
BC131620-1|AAI31621.1| 523|Homo sapiens dynein, cytoplasmic 1, ... 27 8.1
BC032247-1|AAH32247.1| 1014|Homo sapiens retinoblastoma-like 1 (... 27 8.1
AL391114-2|CAI95152.1| 1014|Homo sapiens retinoblastoma-like 1 (... 27 8.1
AL391114-1|CAI95151.1| 1068|Homo sapiens retinoblastoma-like 1 (... 27 8.1
AL365505-2|CAI95178.1| 1014|Homo sapiens retinoblastoma-like 1 (... 27 8.1
AL365505-1|CAI95177.1| 1068|Homo sapiens retinoblastoma-like 1 (... 27 8.1
AL136172-4|CAI95717.1| 1014|Homo sapiens retinoblastoma-like 1 (... 27 8.1
AL136172-3|CAI95716.1| 1068|Homo sapiens retinoblastoma-like 1 (... 27 8.1
AK222653-1|BAD96373.1| 523|Homo sapiens dynein light chain-A va... 27 8.1
AK222573-1|BAD96293.1| 523|Homo sapiens dynein light chain-A va... 27 8.1
>BC015806-1|AAH15806.1| 665|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 665
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 400 PKKPRPPKTNSLSRPGALPP 419
>AY542305-1|AAT08174.1| 665|Homo sapiens GIG10 protein.
Length = 665
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 400 PKKPRPPKTNSLSRPGALPP 419
>AY423734-1|AAS00497.1| 665|Homo sapiens migration-inducing gene 18
protein protein.
Length = 665
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 400 PKKPRPPKTNSLSRPGALPP 419
>AL772197-2|CAH71710.1| 665|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 665
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 400 PKKPRPPKTNSLSRPGALPP 419
>AL772197-1|CAH71709.1| 553|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 553
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 444 PKKPRPPKTNSLSRPGALPP 463
>AL732423-6|CAI40280.1| 645|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 645
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 380 PKKPRPPKTNSLSRPGALPP 399
>AL732423-5|CAI40278.1| 427|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 427
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 162 PKKPRPPKTNSLSRPGALPP 181
>AL732423-4|CAI40277.1| 628|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 628
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 363 PKKPRPPKTNSLSRPGALPP 382
>AL732423-3|CAI40276.1| 665|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 665
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 400 PKKPRPPKTNSLSRPGALPP 419
>AL732327-6|CAI40514.1| 645|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 645
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 380 PKKPRPPKTNSLSRPGALPP 399
>AL732327-4|CAI40512.1| 427|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 427
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 162 PKKPRPPKTNSLSRPGALPP 181
>AL732327-3|CAI40511.1| 628|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 628
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 363 PKKPRPPKTNSLSRPGALPP 382
>AL732327-2|CAI40510.1| 665|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 665
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 400 PKKPRPPKTNSLSRPGALPP 419
>AL732327-1|CAI40509.1| 553|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 553
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 444 PKKPRPPKTNSLSRPGALPP 463
>AL732325-3|CAI41254.1| 628|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 628
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 363 PKKPRPPKTNSLSRPGALPP 382
>AL732325-2|CAI41253.1| 665|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 665
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 400 PKKPRPPKTNSLSRPGALPP 419
>AL732325-1|CAI41252.1| 553|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 553
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 444 PKKPRPPKTNSLSRPGALPP 463
>AF542051-1|AAN77231.1| 628|Homo sapiens CD2 binding protein CD2BP3
protein.
Length = 628
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 363 PKKPRPPKTNSLSRPGALPP 382
>AF329268-1|AAO13348.1| 404|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 404
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 139 PKKPRPPKTNSLSRPGALPP 158
>AF329267-1|AAK95587.1| 404|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 404
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 139 PKKPRPPKTNSLSRPGALPP 158
>AF230904-1|AAF37854.1| 665|Homo sapiens c-Cbl-interacting protein
protein.
Length = 665
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PKEPRSPRSNSLSRVAHVSP 93
PK+PR P++NSLSR + P
Sbjct: 400 PKKPRPPKTNSLSRPGALPP 419
>X87175-1|CAA60642.1| 458|Homo sapiens ER81 protein protein.
Length = 458
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 31 LPKEPRSPRSNSLSRVAHVSPFKFPNGE 114
+ KEP SP S S + PFKF GE
Sbjct: 70 IKKEPHSPCSEISSACSQEQPFKFSYGE 97
>U17163-1|AAA79844.1| 477|Homo sapiens ETV1 protein.
Length = 477
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 31 LPKEPRSPRSNSLSRVAHVSPFKFPNGE 114
+ KEP SP S S + PFKF GE
Sbjct: 88 IKKEPHSPCSEISSACSQEQPFKFSYGE 115
>BC106763-1|AAI06764.1| 477|Homo sapiens ets variant gene 1
protein.
Length = 477
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 31 LPKEPRSPRSNSLSRVAHVSPFKFPNGE 114
+ KEP SP S S + PFKF GE
Sbjct: 88 IKKEPHSPCSEISSACSQEQPFKFSYGE 115
>BC106762-1|AAI06763.1| 477|Homo sapiens ets variant gene 1
protein.
Length = 477
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 31 LPKEPRSPRSNSLSRVAHVSPFKFPNGE 114
+ KEP SP S S + PFKF GE
Sbjct: 88 IKKEPHSPCSEISSACSQEQPFKFSYGE 115
>BC098403-1|AAH98403.1| 477|Homo sapiens ets variant gene 1
protein.
Length = 477
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 31 LPKEPRSPRSNSLSRVAHVSPFKFPNGE 114
+ KEP SP S S + PFKF GE
Sbjct: 88 IKKEPHSPCSEISSACSQEQPFKFSYGE 115
>AF109632-2|AAD29878.1| 459|Homo sapiens ets variant protein ER81
protein.
Length = 459
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 31 LPKEPRSPRSNSLSRVAHVSPFKFPNGE 114
+ KEP SP S S + PFKF GE
Sbjct: 70 IKKEPHSPCSEISSACSQEQPFKFSYGE 97
>AF109632-1|AAD29877.1| 477|Homo sapiens ets variant protein ETV1
protein.
Length = 477
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 31 LPKEPRSPRSNSLSRVAHVSPFKFPNGE 114
+ KEP SP S S + PFKF GE
Sbjct: 88 IKKEPHSPCSEISSACSQEQPFKFSYGE 115
>AC004857-1|AAC62435.1| 454|Homo sapiens ETS-related transcription
factor (binds CGGAW) protein.
Length = 454
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 31 LPKEPRSPRSNSLSRVAHVSPFKFPNGE 114
+ KEP SP S S + PFKF GE
Sbjct: 88 IKKEPHSPCSEISSACSQEQPFKFSYGE 115
>M74547-1|AAA36397.1| 935|Homo sapiens p107 protein.
Length = 935
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 10 PVSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPNG 111
P+S P++ ++P SPR S ++SP K +G
Sbjct: 829 PLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSG 862
>L14812-1|AAA02489.1| 1068|Homo sapiens p107 protein.
Length = 1068
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 10 PVSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPNG 111
P+S P++ ++P SPR S ++SP K +G
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSG 995
>BC131620-1|AAI31621.1| 523|Homo sapiens dynein, cytoplasmic 1,
light intermediate chain 1 protein.
Length = 523
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 10 PVSRSPNLPK-EPRSPRSNSLSRVAHVSP 93
PV SP +P PR+P + S VA VSP
Sbjct: 394 PVDASPRVPGGSPRTPNRSVSSNVASVSP 422
>BC032247-1|AAH32247.1| 1014|Homo sapiens retinoblastoma-like 1 (p107)
protein.
Length = 1014
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 10 PVSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPNG 111
P+S P++ ++P SPR S ++SP K +G
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSG 995
>AL391114-2|CAI95152.1| 1014|Homo sapiens retinoblastoma-like 1 (p107)
protein.
Length = 1014
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 10 PVSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPNG 111
P+S P++ ++P SPR S ++SP K +G
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSG 995
>AL391114-1|CAI95151.1| 1068|Homo sapiens retinoblastoma-like 1 (p107)
protein.
Length = 1068
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 10 PVSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPNG 111
P+S P++ ++P SPR S ++SP K +G
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSG 995
>AL365505-2|CAI95178.1| 1014|Homo sapiens retinoblastoma-like 1 (p107)
protein.
Length = 1014
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 10 PVSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPNG 111
P+S P++ ++P SPR S ++SP K +G
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSG 995
>AL365505-1|CAI95177.1| 1068|Homo sapiens retinoblastoma-like 1 (p107)
protein.
Length = 1068
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 10 PVSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPNG 111
P+S P++ ++P SPR S ++SP K +G
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSG 995
>AL136172-4|CAI95717.1| 1014|Homo sapiens retinoblastoma-like 1 (p107)
protein.
Length = 1014
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 10 PVSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPNG 111
P+S P++ ++P SPR S ++SP K +G
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSG 995
>AL136172-3|CAI95716.1| 1068|Homo sapiens retinoblastoma-like 1 (p107)
protein.
Length = 1068
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 10 PVSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPNG 111
P+S P++ ++P SPR S ++SP K +G
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSG 995
>AK222653-1|BAD96373.1| 523|Homo sapiens dynein light chain-A
variant protein.
Length = 523
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 10 PVSRSPNLPK-EPRSPRSNSLSRVAHVSP 93
PV SP +P PR+P + S VA VSP
Sbjct: 394 PVDASPRVPGGSPRTPNRSVSSNVASVSP 422
>AK222573-1|BAD96293.1| 523|Homo sapiens dynein light chain-A
variant protein.
Length = 523
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 10 PVSRSPNLPK-EPRSPRSNSLSRVAHVSP 93
PV SP +P PR+P + S VA VSP
Sbjct: 394 PVDASPRVPGGSPRTPNRSVSSNVASVSP 422
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,209,399
Number of Sequences: 237096
Number of extensions: 621346
Number of successful extensions: 1660
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1660
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -