Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_I02
         (306 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61949-6|AAB03154.1|  166|Caenorhabditis elegans Hypothetical pr...    27   2.6  
U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical pr...    26   4.5  
AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical ...    26   4.5  
AF026205-6|AAM69068.1|  908|Caenorhabditis elegans Hypothetical ...    25   7.9  
AF026205-5|AAB71258.1|  880|Caenorhabditis elegans Hypothetical ...    25   7.9  
AF026205-4|AAD47129.1|  885|Caenorhabditis elegans Hypothetical ...    25   7.9  
AF026205-3|AAB71257.1|  930|Caenorhabditis elegans Hypothetical ...    25   7.9  
AC025716-7|AAK95888.1|  465|Caenorhabditis elegans Hypothetical ...    25   7.9  

>U61949-6|AAB03154.1|  166|Caenorhabditis elegans Hypothetical
           protein F49E8.6 protein.
          Length = 166

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 13  VSRSPNLPKEPRSPRSNSLSRVAHVSPFKFPNGELIQH*DYYF 141
           ++ +P+ PK+   P      +VAH     +P G L+Q  ++YF
Sbjct: 15  MNEAPSYPKQSAVPPP---PQVAHYPMPTYPQGPLVQQNEFYF 54


>U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical
           protein F10E7.4 protein.
          Length = 819

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 10  PVSRSPNLPKEPRSPRSNSLSRVAHVSPF 96
           P   SPN P EPR P     +++  +SPF
Sbjct: 351 PTYMSPNEPTEPREPIHWITTKLNPLSPF 379


>AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical
           protein Y37H9A.3 protein.
          Length = 792

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 4   PYPVSRSPNLPKEPRSPRSNSLSRVAH 84
           P P + +P   KEP  P+  ++ R+ H
Sbjct: 245 PAPTAAAPPATKEPTDPKKAAIYRILH 271


>AF026205-6|AAM69068.1|  908|Caenorhabditis elegans Hypothetical
           protein T23E7.2e protein.
          Length = 908

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 10  PVSRSPNLPKEPRSPRSNSLSR 75
           P  ++P  PK PR+PR+    R
Sbjct: 464 PAPKTPKTPKTPRTPRTPKTPR 485


>AF026205-5|AAB71258.1|  880|Caenorhabditis elegans Hypothetical
           protein T23E7.2b protein.
          Length = 880

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 10  PVSRSPNLPKEPRSPRSNSLSR 75
           P  ++P  PK PR+PR+    R
Sbjct: 414 PAPKTPKTPKTPRTPRTPKTPR 435


>AF026205-4|AAD47129.1|  885|Caenorhabditis elegans Hypothetical
           protein T23E7.2c protein.
          Length = 885

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 10  PVSRSPNLPKEPRSPRSNSLSR 75
           P  ++P  PK PR+PR+    R
Sbjct: 464 PAPKTPKTPKTPRTPRTPKTPR 485


>AF026205-3|AAB71257.1|  930|Caenorhabditis elegans Hypothetical
           protein T23E7.2a protein.
          Length = 930

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 10  PVSRSPNLPKEPRSPRSNSLSR 75
           P  ++P  PK PR+PR+    R
Sbjct: 464 PAPKTPKTPKTPRTPRTPKTPR 485


>AC025716-7|AAK95888.1|  465|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.21 protein.
          Length = 465

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 70  SRVAHVSPFKFPNGELIQH*DYYF 141
           +++A   P K P+ + + H D+Y+
Sbjct: 25  TKIAKTKPLKTPSAQALDHFDFYY 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,424,124
Number of Sequences: 27780
Number of extensions: 105143
Number of successful extensions: 258
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)