Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I01
(376 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical pr... 31 0.35
Z81462-8|CAB03846.3| 545|Caenorhabditis elegans Hypothetical pr... 31 0.35
U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical pr... 31 0.35
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 31 0.35
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 0.47
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 0.62
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 0.62
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 0.62
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 1.1
Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z72507-3|CAA96625.1| 337|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z48230-1|CAA88262.2| 587|Caenorhabditis elegans Hypothetical pr... 27 4.4
AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical ... 27 4.4
U40954-6|ABQ13043.1| 127|Caenorhabditis elegans Hypothetical pr... 27 5.8
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 27 5.8
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 27 5.8
Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical p... 26 7.6
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 26 7.6
AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical ... 26 7.6
>Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 30.7 bits (66), Expect = 0.35
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 161 RRLRSRPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSEILNESR-DAPDDEI 337
RRL S + G PR D E++ +EN S D+ E ++ L+ R D DD
Sbjct: 318 RRLFSAGGTPGAPRDDEDEADDVENSSMLSNDDLMLNETNGQHFNDSLSPVRKDVTDD-- 375
Query: 338 NLDDP 352
+D+P
Sbjct: 376 -IDEP 379
>Z81462-8|CAB03846.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 30.7 bits (66), Expect = 0.35
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 161 RRLRSRPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSEILNESR-DAPDDEI 337
RRL S + G PR D E++ +EN S D+ E ++ L+ R D DD
Sbjct: 318 RRLFSAGGTPGAPRDDEDEADDVENSSMLSNDDLMLNETNGQHFNDSLSPVRKDVTDD-- 375
Query: 338 NLDDP 352
+D+P
Sbjct: 376 -IDEP 379
>U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical
protein R09F10.3 protein.
Length = 468
Score = 30.7 bits (66), Expect = 0.35
Identities = 21/71 (29%), Positives = 27/71 (38%)
Frame = -3
Query: 281 SQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTSAGSXXXXXXXXXXXRCFWTSASTVQM 102
SQPP V P +R A + P+G P S TSAST +
Sbjct: 50 SQPPASVDGKAGAPDEARTASSASNPQGSEHPGSVDPAATTTAAT-------TSASTTSI 102
Query: 101 TATTRVTLTAS 69
T+T T T +
Sbjct: 103 TSTAATTTTTT 113
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 30.7 bits (66), Expect = 0.35
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 281 SQPPGIVSRPGSPPCRSR-GAPTRRCPRGEAPPTSAG 174
S PPG +PG P R G P P G+APP +G
Sbjct: 178 SGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPPGPSG 214
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 0.47
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = -3
Query: 281 SQPPGIVSRPGSP---PCRSRGAPTRRCPRGEAPPT 183
S PPG PG P P G PTRR P PPT
Sbjct: 241 SDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPT 276
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 0.62
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 281 SQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTSA 177
S PP P PP + R AP R P G +PPT +
Sbjct: 320 SPPPAGTGSPPPPPRQKRQAPERSPPTG-SPPTGS 353
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = -3
Query: 323 EHRVTHSGSRRHELSQPPGIVSRP----GSPPCRSRGAPTRRCPRGEAPPTSAGS 171
+ + T +G R + P G P GSPP G+P G PP GS
Sbjct: 217 QQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS 271
Score = 26.6 bits (56), Expect = 5.8
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3
Query: 281 SQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTSAGS 171
S PP R GSPP G+P G PP AGS
Sbjct: 263 SPPP---PRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 0.62
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 281 SQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTSA 177
S PP P PP + R AP R P G +PPT +
Sbjct: 341 SPPPAGTGSPPPPPRQKRQAPERSPPTG-SPPTGS 374
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = -3
Query: 323 EHRVTHSGSRRHELSQPPGIVSRP----GSPPCRSRGAPTRRCPRGEAPPTSAGS 171
+ + T +G R + P G P GSPP G+P G PP GS
Sbjct: 238 QQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS 292
Score = 26.6 bits (56), Expect = 5.8
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3
Query: 281 SQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTSAGS 171
S PP R GSPP G+P G PP AGS
Sbjct: 284 SPPP---PRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 0.62
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 281 SQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTSA 177
S PP P PP + R AP R P G +PPT +
Sbjct: 326 SPPPAGTGSPPPPPRQKRQAPERSPPTG-SPPTGS 359
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = -3
Query: 323 EHRVTHSGSRRHELSQPPGIVSRP----GSPPCRSRGAPTRRCPRGEAPPTSAGS 171
+ + T +G R + P G P GSPP G+P G PP GS
Sbjct: 223 QQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS 277
Score = 26.6 bits (56), Expect = 5.8
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3
Query: 281 SQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTSAGS 171
S PP R GSPP G+P G PP AGS
Sbjct: 269 SPPP---PRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = -3
Query: 317 RVTHSGSRRHELSQPPGIVSRPGSPP----CRSRGAPTRRCPRGEAPP 186
R + S RR +S+ P V R SPP RSR P RR R +PP
Sbjct: 112 RRSPSPPRRRRISRSP--VRRSRSPPRRQVSRSRSPPPRRQQRSRSPP 157
>Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical
protein F22G12.7 protein.
Length = 447
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 215 ESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDDEINLDDPCMKVHCS 373
E EHLEN + +S + R ++E A +SE+ + + + + +++ CS
Sbjct: 48 EKEHLENSIKKSKNMR--NQSEEAYLSELKRQGLEKHAANVKHQETMLRMSCS 98
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 27.5 bits (58), Expect = 3.3
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 13/55 (23%)
Frame = -3
Query: 296 RRHELSQPP----GIVSRPGSPPCRSRGAP----TRRCP-----RGEAPPTSAGS 171
RR S PP G +S P PP RS GAP + R P RG PP S+ S
Sbjct: 290 RRGTTSGPPSRLRGRMSHPMGPPRRSSGAPPSSASNRRPVESSSRGPPPPPSSSS 344
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 27.5 bits (58), Expect = 3.3
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 13/55 (23%)
Frame = -3
Query: 296 RRHELSQPP----GIVSRPGSPPCRSRGAP----TRRCP-----RGEAPPTSAGS 171
RR S PP G +S P PP RS GAP + R P RG PP S+ S
Sbjct: 290 RRGTTSGPPSRLRGRMSHPMGPPRRSSGAPPSSASNRRPVESSSRGPPPPPSSSS 344
>Z72507-3|CAA96625.1| 337|Caenorhabditis elegans Hypothetical
protein F17C11.3 protein.
Length = 337
Score = 27.5 bits (58), Expect = 3.3
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 175 PADVGGASPRGHLRVGAPRERHGGEPGRETIPG 273
P D+G PRG + PR R G PG PG
Sbjct: 183 PGDIGSDGPRGKRGLRGPRGR-PGRPGINGNPG 214
>Z48230-1|CAA88262.2| 587|Caenorhabditis elegans Hypothetical
protein F42G10.1 protein.
Length = 587
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 206 DISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDDEIN 340
++ E E + G AES + E + V L+E D DD N
Sbjct: 510 EVEEQEESKEGSAESSSSSSSESDEESSVERELDEVSDGLDDSEN 554
>AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical
protein T22B11.1 protein.
Length = 472
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 236 GMAESLDERRFQEAERARVSEILNESRDAPDDEINLDD 349
G +E +DE ++ ARVSEI + ++ + NLDD
Sbjct: 105 GYSEQIDEFLLNPSQFARVSEIWQDVQNTKNFIENLDD 142
>U40954-6|ABQ13043.1| 127|Caenorhabditis elegans Hypothetical
protein ZK813.7 protein.
Length = 127
Score = 26.6 bits (56), Expect = 5.8
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 332 HRQEHRVTHSGSRRHELSQ-PPGIVSRPGSPPCR 234
HR+E ++S SR HE S+ P RP P R
Sbjct: 41 HREERSASNSHSRSHESSELKPAGFGRPQPGPIR 74
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 26.6 bits (56), Expect = 5.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 254 PGSPPCRSRGAPTRRCPRGEAPPTSAG 174
P SPP + AP P+ +APPTSAG
Sbjct: 324 PPSPPPYRKPAP----PQPQAPPTSAG 346
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 26.6 bits (56), Expect = 5.8
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -3
Query: 275 PPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTSAGS 171
PPG PGSP + GAP P G PP G+
Sbjct: 232 PPGPPGPPGSPGENTEGAPGLDGPLG--PPGKPGT 264
>Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical
protein K08E3.8 protein.
Length = 441
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 326 QEHRVTHSGSRRHELSQPPGIVSRPGS 246
Q+ ++ GS++ + Q PG + RPGS
Sbjct: 173 QQQTLSRPGSQQSQHIQQPGSIQRPGS 199
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -3
Query: 296 RRHELSQPPGIVSRPGSPPCRSRGAP-TRRCPRGEAPPTS 180
R+ + + P S P PP S AP TR P APP +
Sbjct: 279 RQDDRTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPAT 318
>AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical
protein Y54G2A.11a protein.
Length = 482
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 212 SESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDDEI 337
S+S+ L +E + E +EAE +EIL S + +DE+
Sbjct: 68 SDSDSLSESESE-ISEPEEEEAEEGAAAEILENSDNEGEDEV 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,784,280
Number of Sequences: 27780
Number of extensions: 150617
Number of successful extensions: 774
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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