Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_I01
(376 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g01280.1 68418.m00037 expressed protein 34 0.027
At4g35785.2 68417.m05083 transformer serine/arginine-rich ribonu... 33 0.082
At3g59550.1 68416.m06646 cohesion family protein SYN3 (SYN3) nea... 32 0.14
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 30 0.44
At4g35785.1 68417.m05082 transformer serine/arginine-rich ribonu... 30 0.58
At4g29310.1 68417.m04190 expressed protein 29 1.0
At5g04140.1 68418.m00401 glutamate synthase (GLU1) / ferredoxin-... 29 1.3
At3g26720.1 68416.m03341 glycosyl hydrolase family 38 protein si... 29 1.3
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 28 1.8
At5g50115.1 68418.m06206 hypothetical protein temporary automate... 28 2.3
At5g04140.2 68418.m00402 glutamate synthase (GLU1) / ferredoxin-... 28 2.3
At5g53800.1 68418.m06685 expressed protein 27 3.1
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 3.1
At3g15820.1 68416.m02002 phosphatidic acid phosphatase-related /... 27 3.1
At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing ... 27 3.1
At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4) cont... 27 4.1
At1g26150.1 68414.m03192 protein kinase family protein similar t... 27 4.1
At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 27 5.4
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 27 5.4
At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associa... 26 7.1
At5g40450.1 68418.m04905 expressed protein 26 7.1
At4g12460.1 68417.m01971 oxysterol-binding family protein simila... 26 7.1
At3g05490.1 68416.m00601 rapid alkalinization factor (RALF) fami... 26 7.1
At1g25580.1 68414.m03176 no apical meristem (NAM) family protein... 26 7.1
At1g21170.1 68414.m02647 expressed protein 26 7.1
At5g02720.1 68418.m00212 expressed protein predicted protein, Ar... 26 9.4
At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp... 26 9.4
At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp... 26 9.4
At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp... 26 9.4
At4g27120.2 68417.m03898 expressed protein 26 9.4
At4g27120.1 68417.m03897 expressed protein 26 9.4
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 26 9.4
At3g22710.1 68416.m02865 F-box family protein contains F-box dom... 26 9.4
At3g15830.1 68416.m02003 phosphatidic acid phosphatase-related /... 26 9.4
At3g07620.1 68416.m00912 exostosin family protein contains Pfam ... 26 9.4
At2g29580.1 68415.m03592 zinc finger (CCCH-type) family protein ... 26 9.4
At2g22230.1 68415.m02638 beta-hydroxyacyl-ACP dehydratase, putat... 26 9.4
At1g47970.1 68414.m05343 expressed protein 26 9.4
At1g02120.1 68414.m00138 GRAM domain-containing protein-related ... 26 9.4
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 34.3 bits (75), Expect = 0.027
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -3
Query: 305 SGSRRHELSQPPGIVSRPGSPPCRSRGAPTRR--CPRGEAPPTSAGSXXXXXXXXXXXRC 132
SG RR S SRP +P +S+ P +R P A T+ + R
Sbjct: 80 SGIRRPSSSSSSRSTSRPPTPTRKSK-TPAKRPSTPTSRATSTTTRATLTSSSTTSSTRS 138
Query: 131 FWTSASTVQMTATTRVTLTAS 69
W+ S+ T T+RVTLTA+
Sbjct: 139 -WSRPSSSSGTGTSRVTLTAA 158
>At4g35785.2 68417.m05083 transformer serine/arginine-rich
ribonucleoprotein, putative similar to transformer-SR
ribonucleoprotein [Nicotiana tabacum]
gi|1781299|emb|CAA70700
Length = 141
Score = 32.7 bits (71), Expect = 0.082
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 2 RSRLRGRWQESSKPRI*ARGQDKRLLV*PSWSPSSARSTPRSKNIVDAIGA--YVRRLRS 175
RSR R R + S+PR+ +R + V PS S +RS R ++ V+ G YV L +
Sbjct: 22 RSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGRSEVENPGTTLYVTGLST 81
Query: 176 RPTSAGL 196
R T L
Sbjct: 82 RVTDKDL 88
>At3g59550.1 68416.m06646 cohesion family protein SYN3 (SYN3) nearly
identical to cohesion family protein SYN3 [Arabidopsis
thaliana] GI:12006362; supporting cDNA
gi|12006361|gb|AF281155.1|AF281155
Length = 693
Score = 31.9 bits (69), Expect = 0.14
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 95 SPSSARSTPRSKNIVDAIGAYVR-RLRSRPTSAGLPRGDISESEHLENGMAESLDERRFQ 271
S SA T R++ A+ Y++ R S PT++ P GD+S SE L G L R F
Sbjct: 603 SQDSAALTGRAR----ALAQYLKQRSSSSPTTSSHPSGDLSLSEILA-GKTRKLAARMFF 657
Query: 272 EAERARVSEILNESRDAPDDEINL 343
E + +++ +D P +I L
Sbjct: 658 ETLVLKSRGLIDMQQDRPYGDIAL 681
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 30.3 bits (65), Expect = 0.44
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
Frame = -3
Query: 329 RQEHRVTHSG-------SRRHELSQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTSA 177
R+ R TH G SRR PP R SPP R R +P+ R +P A
Sbjct: 290 RRHRRPTHEGRRQSPAPSRRRRSPSPPARRRRSPSPPARRRRSPSPPARRHRSPTPPA 347
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 299 SRRHELSQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPP 186
+RR PP R +PP R R +P+ R +PP
Sbjct: 327 ARRRRSPSPPARRHRSPTPPARQRRSPSPPARRHRSPP 364
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 326 QEHRVTHSGSRRHELSQPPGIVSRPGSPPCRSRGAPTRRCPRGEAP 189
++ R +RRH S PP R SPP R R +P+ R +P
Sbjct: 348 RQRRSPSPPARRHR-SPPPARRRRSPSPPARRRRSPSPPARRRRSP 392
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 299 SRRHELSQPPGIVSRPGSPPCRSRGAPTRRCPRGEAP 189
+RR PP R SPP R R +P+ R +P
Sbjct: 366 ARRRRSPSPPARRRRSPSPPARRRRSPSPLYRRNRSP 402
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -3
Query: 299 SRRHELSQPPGIVSRPGSPPCRSRGAPT--RRCPRGEAPP 186
+RR PP R SPP R +PT R R +PP
Sbjct: 317 ARRRRSPSPPARRRRSPSPPARRHRSPTPPARQRRSPSPP 356
>At4g35785.1 68417.m05082 transformer serine/arginine-rich
ribonucleoprotein, putative similar to transformer-SR
ribonucleoprotein [Nicotiana tabacum]
gi|1781299|emb|CAA70700
Length = 140
Score = 29.9 bits (64), Expect = 0.58
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 RSRLRGRWQESSKPRI*ARGQDKRLLV*PSWSPSSARSTPRSKNIVD-AIGAYVRRLRSR 178
RSR R R + S+PR+ +R + V PS S +RS R + + YV L +R
Sbjct: 22 RSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGSEVENPGTTLYVTGLSTR 81
Query: 179 PTSAGL 196
T L
Sbjct: 82 VTDKDL 87
>At4g29310.1 68417.m04190 expressed protein
Length = 424
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +2
Query: 89 SWSPSSARSTPRSKNIVDAIGAYVRRLRSRPTSAGLPRGDISESEHLENGMAESLDERRF 268
SW P R + +D +G +R TS G+P + + S + G S+D R
Sbjct: 285 SWKPWGRLEAWRERGAIDGLGYKFELVRDNSTSTGIPIAEGTMS--TKQGGKFSIDRRVS 342
Query: 269 QEAERARVS 295
+ E +S
Sbjct: 343 GQGESPAIS 351
>At5g04140.1 68418.m00401 glutamate synthase (GLU1) /
ferredoxin-dependent glutamate synthase (Fd-GOGAT 1)
identical to ferredoxin-dependent glutamate synthase
precursor [Arabidopsis thaliana] GI:3869251
Length = 1622
Score = 28.7 bits (61), Expect = 1.3
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 89 SWSPSSARSTPRSKNIVDAIGAYVRRLRSRPTSAGLPRGDISESEHLENGMAESLDERRF 268
S +PSS S+ ++ VD +G Y + R+R RGD S S + ++ R
Sbjct: 14 STTPSSVLSSDKNFFFVDFVGLYCKSKRTRRRL----RGDSSSSSRSSSSLSRLSSVRAV 69
Query: 269 QEAERAR-VSEILNESRDAPDDEI-NLDD 349
+ ER VSE S A ++ NL+D
Sbjct: 70 IDLERVHGVSEKDLSSPSALRPQVANLED 98
>At3g26720.1 68416.m03341 glycosyl hydrolase family 38 protein
similar to lysosomal alpha-mannosidase GI:3522867 from
[Homo sapiens]
Length = 1019
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 227 LENGMAESLDERRFQEAERARVSEILNESRDAPD 328
LENG E + RR Q + V EILNE+ P+
Sbjct: 794 LENGQIELMLHRRMQHDDIRGVGEILNETVCLPE 827
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 173 SRPTSAGLPRGDISESEHLENG----MAESLDERRFQEAERARVSEIL-NESRDAPDDEI 337
S + G ISESE LENG ++ D+ + Q+ +R + +L N D P++E
Sbjct: 1094 SNRNADGKENNSISESEALENGENSQESDEKDKGQQQQVLASRGAMLLQNALADKPEEET 1153
Query: 338 NLD 346
N D
Sbjct: 1154 NDD 1156
>At5g50115.1 68418.m06206 hypothetical protein temporary automated
functional assignment
Length = 485
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +2
Query: 242 AESLDERRFQEAERARVSEILNESRDAPDDEINL 343
+ SLD +++ A+R +++E N + +DE N+
Sbjct: 231 SSSLDSKKYDAAKRVKINETKNTTHMVNEDEYNV 264
>At5g04140.2 68418.m00402 glutamate synthase (GLU1) /
ferredoxin-dependent glutamate synthase (Fd-GOGAT 1)
identical to ferredoxin-dependent glutamate synthase
precursor [Arabidopsis thaliana] GI:3869251
Length = 1648
Score = 27.9 bits (59), Expect = 2.3
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 89 SWSPSSARSTPRSKNIVDAIGAYVRRLRSRPTSAGLPRGDISESEHLENGMAESLDERRF 268
S +PSS S+ ++ VD +G Y + R+R RGD S S + ++ R
Sbjct: 14 STTPSSVLSSDKNFFFVDFVGLYCKSKRTRRRL----RGDSSSSSRSSSSLSRLSSVRAV 69
Query: 269 QEAERAR-VSE 298
+ ER VSE
Sbjct: 70 IDLERVHGVSE 80
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 122 RSKNIVDAIGAYVRRLRSRPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSE 298
R K D + RR R +S+ SESE+ ++ +ES DERR ++ +R E
Sbjct: 84 RGKRKSDRKSSRSRRRRRDYSSSSSDSESESESEYSDSEESESEDERRRRKRKRKEREE 142
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 275 PPGIVSRPGSPPCRSRGAPTRRCPRGEAPPT 183
PP + PGSPP S P+ P P T
Sbjct: 536 PPSTPTSPGSPPSPSSPTPSSPIPSPPTPST 566
>At3g15820.1 68416.m02002 phosphatidic acid phosphatase-related /
PAP2-related contains Pfam profile PF01569: PAP2
superfamily
Length = 301
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 218 SEHLENGMAESLDERRFQEAERARVSEILN 307
S H+ M SLD RR Q A V +ILN
Sbjct: 214 SGHVAGSMIASLDMRRMQRLRLAMVFDILN 243
>At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing
protein
Length = 809
Score = 27.5 bits (58), Expect = 3.1
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -3
Query: 317 RVTHSGSRRHELSQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPP 186
R + S RR PP +RP PP R+R P R PP
Sbjct: 530 RASGSRGRRPRPPLPPPARARPLPPPARARPMPPPARARPLPPP 573
>At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4)
contains Pfam domain PF00098: Zinc knuckle; identical to
cDNA CAX-interacting protein 4 GI:27651998
Length = 332
Score = 27.1 bits (57), Expect = 4.1
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 161 RRLRSRPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDDEI 337
RR RS + R +SESE E G ++ ERR R R + +ES D D +
Sbjct: 200 RRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKERR----GRKRDEDDSDESEDEDDRRV 254
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -3
Query: 275 PPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTSAGS 171
PP V P SPP +S P P P T S
Sbjct: 287 PPSSVVSPPSPPRKSVSGPDNPSPNNPTPVTDNSS 321
>At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 162
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 254 PGSPPCRSRGAPTRRCPRGEAPPTSAG 174
P SPP S PT CP +PP+S G
Sbjct: 52 PPSPPPPS--TPTTACPPPPSPPSSGG 76
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 299 SRRHELSQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTS 180
++ H +PP IV P PP + PT+ P PPT+
Sbjct: 106 TKPHPHPKPP-IVKPPTKPPPSTPKPPTKPPPSTPKPPTT 144
>At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|P27048 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Mus musculus}
Length = 254
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = -3
Query: 302 GSRRHELSQPPGIVSRPG----SPPCRSRGAPTRRCPRGEAPP 186
G + ++S+PP I+ PG PP +G P P G PP
Sbjct: 142 GMMQPQISRPPQIIRPPGQMPPQPPFAGQGGPPP--PYGMRPP 182
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +2
Query: 140 DAIGAYVRRLRSRPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSEILNESRD 319
+ I V L+ TS + + E+ E+ + + D+++ E + SE+ +++D
Sbjct: 2364 EKISLQVEHLKDFETSKKEQKDETHETVKEEDQIVDIKDKKKDDEEQEIVSSEVKKDNKD 2423
Query: 320 APDDEINLD 346
A + E+ D
Sbjct: 2424 ARELEVGND 2432
>At4g12460.1 68417.m01971 oxysterol-binding family protein similar
to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 694
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 215 ESEHLENGMAESLDERRFQEAERARVSEILNES 313
+ HLENG E +E + + R R+S + ES
Sbjct: 613 DQRHLENGEYEKANEEKQRLERRQRMSRQIQES 645
>At3g05490.1 68416.m00601 rapid alkalinization factor (RALF) family
protein similar to RALF precursor [Nicotiana tabacum]
GI:16566316
Length = 119
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -3
Query: 257 RPGSPPCRSRGAPTRRCPRG-EAPPTSAG 174
R S PC RGA C RG +A P S G
Sbjct: 82 RRNSVPCSRRGASYYNCQRGAQANPYSRG 110
>At1g25580.1 68414.m03176 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to putative NAM protein (GP:21554371)
(Arabidopsis thaliana)
Length = 449
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 215 ESEH-LENGMAESLDERRFQEAER 283
E EH LENG E LD++ QE +R
Sbjct: 310 ELEHGLENGAKEMLDDKEEQEKDR 333
>At1g21170.1 68414.m02647 expressed protein
Length = 1090
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 260 RRFQEAERARVSEILNESRDAPDDEINLD 346
+R EAE AR + ESR AP NLD
Sbjct: 134 KRVNEAELARKVRDMRESRTAPSVTQNLD 162
>At5g02720.1 68418.m00212 expressed protein predicted protein,
Arabidopsis thaliana
Length = 138
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 257 ERRFQEAERARVSEILNESRDAPDDEINLD 346
+R ++ ++AR ++ ES D P+DE+ LD
Sbjct: 107 QRMKKQRDQARFMQLFEES-DEPEDELGLD 135
>At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 275 PPGIVSRPGSPPCRSRGAPTRRCPRGEAPP 186
PPG PGS P + P + P GE PP
Sbjct: 462 PPGAF--PGSIPLNASVPPPTQPPAGEKPP 489
>At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 275 PPGIVSRPGSPPCRSRGAPTRRCPRGEAPP 186
PPG PGS P + P + P GE PP
Sbjct: 462 PPGAF--PGSIPLNASVPPPTQPPAGEKPP 489
>At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 275 PPGIVSRPGSPPCRSRGAPTRRCPRGEAPP 186
PPG PGS P + P + P GE PP
Sbjct: 462 PPGAF--PGSIPLNASVPPPTQPPAGEKPP 489
>At4g27120.2 68417.m03898 expressed protein
Length = 298
Score = 25.8 bits (54), Expect = 9.4
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 119 PRSKNIVDAIGAYVRRLRSRPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSE 298
PR +N+ A G RR+R RP ++G + E+ E DE +A ++ E
Sbjct: 43 PR-ENVARAGGG--RRMRRRPAASGASSSTSNVQENGSGSEDEDEDEAGGTQARASKKKE 99
Query: 299 ILNESRDA 322
+ R+A
Sbjct: 100 KKRQEREA 107
>At4g27120.1 68417.m03897 expressed protein
Length = 298
Score = 25.8 bits (54), Expect = 9.4
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 119 PRSKNIVDAIGAYVRRLRSRPTSAGLPRGDISESEHLENGMAESLDERRFQEAERARVSE 298
PR +N+ A G RR+R RP ++G + E+ E DE +A ++ E
Sbjct: 43 PR-ENVARAGGG--RRMRRRPAASGASSSTSNVQENGSGSEDEDEDEAGGTQARASKKKE 99
Query: 299 ILNESRDA 322
+ R+A
Sbjct: 100 KKRQEREA 107
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 275 PPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTS 180
PP ++RPG PP S+ R APP++
Sbjct: 90 PPAAMARPGGPPQVSQPGGFPPVGRPVAPPSN 121
>At3g22710.1 68416.m02865 F-box family protein contains F-box domain
Pfam:PF00646
Length = 326
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 245 ESLDERRFQEAERARVSEILNESRDAPDDEINLDDPCM 358
E E+ F +A + + +L E R PD + + +PC+
Sbjct: 40 ERFTEKHFSKAPKESMVLMLKEHRVCPDKRLVVWNPCL 77
>At3g15830.1 68416.m02003 phosphatidic acid phosphatase-related /
PAP2-related contains Pfam profile PF01569: PAP2
superfamily
Length = 296
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 218 SEHLENGMAESLDERRFQEAERARVSEILN 307
S H+ M SLD +R Q A V +ILN
Sbjct: 209 SGHVAGSMIASLDMKRMQRFRLAMVFDILN 238
>At3g07620.1 68416.m00912 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 470
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 284 ARVSEILNESRDAPDDEINL 343
A +SE N +DAP EINL
Sbjct: 273 ANISEYFNPEKDAPFPEINL 292
>At2g29580.1 68415.m03592 zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|O59800 Cell cycle control protein cwf5
{Schizosaccharomyces pombe}; contains Pfam profile:
PF00076 RNA recognition motif (aka RRM, RBD, or RNP
domain)
Length = 483
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 308 HSGSRRHELSQPPGIVSRPGSPPCRSRGAP 219
HS H+ Q PG SRP P S AP
Sbjct: 427 HSQQADHDYPQQPGPGSRPNPPHPSSVSAP 456
>At2g22230.1 68415.m02638 beta-hydroxyacyl-ACP dehydratase, putative
similar to beta-hydroxyacyl-ACP dehydratase from
Toxoplasma gondii [GI:3850997]; contains Pfam profile
PF01377 Thioester dehydratase
Length = 220
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 332 HRQEHRVTH-SGSRRHELSQPPGIVSRPGSPPCRSRGAPT 216
H H+ H S SR H +S PP S + C + G T
Sbjct: 18 HHHHHQPLHLSSSRSHSVSLPPNKRSNSLTLRCSTNGDST 57
>At1g47970.1 68414.m05343 expressed protein
Length = 198
Score = 25.8 bits (54), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 176 RPTSAGLPRGDISESEHLENGMAESLDERRFQEAER---ARVSEILNESRDAPDDE 334
RP D S+ E ENG+ E +DE E + A SE + + AP+++
Sbjct: 128 RPVGRAEDEEDASDFEPEENGVEEDIDEGEDDENDNSGGAGKSEAPPKRKRAPEED 183
>At1g02120.1 68414.m00138 GRAM domain-containing protein-related
contains low similarity to PF02893: GRAM domain
Length = 556
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 302 GSRRHELSQPPGIVSRPGSPPCRSRGAPTRRCPRGEAPPTSAG 174
G+ + + S P +VS PP +G+P R P +P S G
Sbjct: 64 GTMKVDSSASPEVVS--DLPPSSPKGSPDRHDPSTSSPSPSRG 104
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,405,071
Number of Sequences: 28952
Number of extensions: 137386
Number of successful extensions: 566
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 507810264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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