Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_H17
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    25   0.33 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   4.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   4.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   5.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   9.4  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.33
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 118 RPSAPPYPLHWGTSVSLIQWVR 53
           +P  PPYP + GTS  L  + R
Sbjct: 204 QPFPPPYPFYPGTSAMLAAYQR 225


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
 Frame = -3

Query: 204 PCRPYPKRGGLAR---AVLLGKRGRVTHWSGDV 115
           P  PYP  G L     +V  G  G    W+G V
Sbjct: 209 PSTPYPPPGSLGSMGVSVPCGTSGNPLEWTGQV 241


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -1

Query: 446 ITKLHDNYNSKFKHLEDGTKRILYLXXMHEENTDSKN 336
           ITKL  NYN   K   +  K       +  E+ DS N
Sbjct: 186 ITKLKINYNPFAKGFRENGKSSAKRKQLVSEHPDSPN 222


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 16  FFFFGGKCIYALPLPIVL 69
           +  FG   +YALPL +++
Sbjct: 219 YLLFGMVMMYALPLAVII 236


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 16  FFFFGGKCIYALPLPIVL 69
           +  FG   +YALPL +++
Sbjct: 219 YLLFGMVMMYALPLAVII 236


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 124 RRRPSAPPYPLHWGTSVSLIQWVRV 50
           R +PS P Y + W  +V L  + R+
Sbjct: 126 RIKPSKPKYDVTWDPAVVLDYFERL 150


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +2

Query: 344 YQYSLHAXX*GIKYALSHLLGV*IYCCNCHVIL 442
           Y  S H     IK  L       +YC N +VI+
Sbjct: 52  YSKSFHRNEIHIKIVLMFFKEASLYCFNYYVIV 84


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 48   TTLTHCISETEVPQ 89
            TT  HC +E +VP+
Sbjct: 1189 TTPIHCQTEQDVPE 1202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,113
Number of Sequences: 336
Number of extensions: 2398
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)