Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_H17
         (449 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    25   0.50 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   8.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   8.2  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 180 GGLARAVLLGKRGRVTHW 127
           GG ARAV+ G+   V++W
Sbjct: 76  GGAARAVVAGRLSEVSNW 93


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 210 ATPCRPYPKRG 178
           ATPC P P RG
Sbjct: 391 ATPCTPSPPRG 401


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 6    IYVFFFFRGEMHLCTTLTHCISETEVP 86
            I V  F R    + TT+T+C +E +VP
Sbjct: 1188 IQVLAFTRVGDGVPTTVTYCQTEEDVP 1214


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 6    IYVFFFFRGEMHLCTTLTHCISETEVP 86
            I V  F R    + TT+T+C +E +VP
Sbjct: 1184 IQVLAFTRVGDGVPTTVTYCQTEEDVP 1210


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 35  NAFMHYPYPLY**DRSPPMQWVRGCGGTS 121
           N ++ +P  +    R PP  WV   GG++
Sbjct: 144 NYYIWHPGKIVNGKRVPPTNWVGVFGGSA 172


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 35  NAFMHYPYPLY**DRSPPMQWVRGCGGTS 121
           N ++ +P  +    R PP  WV   GG++
Sbjct: 144 NYYIWHPGKIVNGKRVPPTNWVGVFGGSA 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,277
Number of Sequences: 438
Number of extensions: 3242
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)