BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_H16
(514 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U04435-1|AAA18958.1| 609|Drosophila melanogaster GLI-Kr zinc fi... 32 0.40
BT029391-1|ABK56895.1| 609|Drosophila melanogaster FI01113p pro... 32 0.40
AY051783-1|AAK93207.1| 609|Drosophila melanogaster LD30441p pro... 32 0.40
AE014297-163|AAF52084.1| 609|Drosophila melanogaster CG1133-PA ... 32 0.40
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P... 30 1.6
AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-P... 29 4.9
AE013599-302|AAF59293.1| 328|Drosophila melanogaster CG12835-PA... 28 8.5
>U04435-1|AAA18958.1| 609|Drosophila melanogaster GLI-Kr zinc
finger pair-rule proteinprotein.
Length = 609
Score = 32.3 bits (70), Expect = 0.40
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 63 GMGYNQMPFHPEHHHNRLR 119
G G+ Q PFH HHH+++R
Sbjct: 125 GSGFGQHPFHSHHHHHQMR 143
>BT029391-1|ABK56895.1| 609|Drosophila melanogaster FI01113p
protein.
Length = 609
Score = 32.3 bits (70), Expect = 0.40
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 63 GMGYNQMPFHPEHHHNRLR 119
G G+ Q PFH HHH+++R
Sbjct: 125 GSGFGQHPFHSHHHHHQMR 143
>AY051783-1|AAK93207.1| 609|Drosophila melanogaster LD30441p
protein.
Length = 609
Score = 32.3 bits (70), Expect = 0.40
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 63 GMGYNQMPFHPEHHHNRLR 119
G G+ Q PFH HHH+++R
Sbjct: 125 GSGFGQHPFHSHHHHHQMR 143
>AE014297-163|AAF52084.1| 609|Drosophila melanogaster CG1133-PA
protein.
Length = 609
Score = 32.3 bits (70), Expect = 0.40
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 63 GMGYNQMPFHPEHHHNRLR 119
G G+ Q PFH HHH+++R
Sbjct: 125 GSGFGQHPFHSHHHHHQMR 143
>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
protein.
Length = 4129
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 RLRSPYFGEDVFDTGRFWSELSSELRELDNMLADF--YRKFPTPASSSQG 254
R+ +PY G+D+ F+ L S+ + L++ DF Y+K P S+G
Sbjct: 2702 RIFNPY-GDDICHAELFYDSLDSQQKPLEDQYTDFKKYKKSGAPPPLSEG 2750
>AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-PA
protein.
Length = 2695
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 54 PYYGMGYNQMPFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSELRELDNMLADFYRKFPT 233
PY YN MP P L+ PY G +F+ + ++ +++ + A F R P
Sbjct: 962 PYTSGFYNGMPNTPSAQERFLQGPY-GSPMFNQNQMYNYYAAQAQA--QAQAQFLRTPPA 1018
Query: 234 PAS 242
P S
Sbjct: 1019 PGS 1021
>AE013599-302|AAF59293.1| 328|Drosophila melanogaster CG12835-PA
protein.
Length = 328
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 303 EKDIVVQARTGLLMVQAVHKYEGDVQKNYLDVRTLPDCVNVNGSW 437
+ D+ V TG L + + +G Y D+R L C N N W
Sbjct: 224 DDDVEVAMLTGSLTPSQIARIQGQQILRYDDLRNLNRCRNRNAVW 268
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,336,042
Number of Sequences: 53049
Number of extensions: 514372
Number of successful extensions: 1779
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1775
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -