Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_H16
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical ... 34 0.069
U41268-5|AAA82438.1| 349|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 2.0
U58756-3|AAC48084.2| 181|Caenorhabditis elegans Hypothetical pr... 29 2.6
U58756-2|AAC48083.2| 322|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z74472-8|CAD54135.1| 75|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical ... 27 7.9
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 27 7.9
>AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical
protein Y62H9A.4 protein.
Length = 212
Score = 33.9 bits (74), Expect = 0.069
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 6 MIALFVLCLAAAVSAAPYYGMGYNQMPFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSEL 185
M ALF+ +A AV + Y + +P HH N + Y D D+ +EL S
Sbjct: 1 MYALFLSVIACAVVVSANQYNDYGTISHYPGHHSN---NRYSTSDSSDSSE--NELKSRS 55
Query: 186 RELDNMLADFYRKF-PTPASSSQGIEGNEYK 275
D ++ + P P +++ G GNEY+
Sbjct: 56 NS-DERYPEYPGVYAPQPPATNYGTNGNEYR 85
>U41268-5|AAA82438.1| 349|Caenorhabditis elegans Hypothetical
protein T14G12.6 protein.
Length = 349
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = -3
Query: 227 ELSVEVGEHVVQLA*LAGEFGPEPTGIEDVLAEVWASQPIVMVFRMERHLVVPHTVVRCR 48
EL+ E+G+ + +A A P PT D L + + P +V + + + + RC+
Sbjct: 64 ELTCEIGDFPIAVAAFADSEIPPPTAAADELGILPPNSPEQIVLGLNAYYGL---LQRCK 120
Query: 47 RHGRSKTENK*SDHV 3
+ + T+NK SD +
Sbjct: 121 QWKANFTKNKTSDSI 135
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical protein
C11E4.6 protein.
Length = 1170
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 95 RMERHLVVPHTVVRCRRHGRSKTENK 18
RM++ L + T+VRCR + + TEN+
Sbjct: 1143 RMDKSLPIEGTMVRCRHNSQQTTENQ 1168
>U58756-3|AAC48084.2| 181|Caenorhabditis elegans Hypothetical
protein F58F9.3a protein.
Length = 181
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 186 RELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDI 314
+ D +L F + +++QG+E YK+T+ EKD+
Sbjct: 93 KNADGILVFSTNNFASAKATNQGLEIGRYKITVQAVKPSEKDL 135
>U58756-2|AAC48083.2| 322|Caenorhabditis elegans Hypothetical
protein F58F9.3b protein.
Length = 322
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 186 RELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDI 314
+ D +L F + +++QG+E YK+T+ EKD+
Sbjct: 93 KNADGILVFSTNNFASAKATNQGLEIGRYKITVQAVKPSEKDL 135
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 28.3 bits (60), Expect = 3.4
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Frame = -2
Query: 465 RFLVRP---DCKSNFRSHLRSPAMS*HP--NNSSVHRPRTYEQLAPSEDRSGLGQRCPSH 301
+FL+RP DC ++ R P + S HR Y+ L L C S
Sbjct: 327 QFLIRPDIVDCVVSYLRSTRDPEFRTYRILRRMSTHRTHIYQLLDLQFHVRILTGLCASP 386
Query: 300 QRRLKV*SPCIRCLRCLE 247
R LK C +C +C E
Sbjct: 387 CRMLKYAKSCKQCDKCSE 404
>Z74472-8|CAD54135.1| 75|Caenorhabditis elegans Hypothetical
protein F23H12.8 protein.
Length = 75
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 6 MIALFVLCLAAAVSAAPYYGMGY 74
+++L V+C A + A YYG GY
Sbjct: 8 LVSLLVICAFVAETDAQYYGYGY 30
>AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical
protein K10F12.4b protein.
Length = 123
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -3
Query: 443 VSPTSVHIYAVRQCPNIQIILLYIA 369
++P + +Y++R CP Q +L+Y+A
Sbjct: 94 LTPGNYRLYSMRFCPYAQRVLIYLA 118
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -3
Query: 443 VSPTSVHIYAVRQCPNIQIILLYIA 369
++P + +Y++R CP Q +L+Y+A
Sbjct: 94 LTPGNYRLYSMRFCPYAQRVLIYLA 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,157,512
Number of Sequences: 27780
Number of extensions: 252228
Number of successful extensions: 794
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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