Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_H15
(568 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 30 0.27
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 30 0.27
SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein Vps1|Schizo... 27 1.5
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 1.5
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 27 1.9
SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces po... 26 3.4
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 26 3.4
SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 26 3.4
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 3.4
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 26 4.4
SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|ch... 26 4.4
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 26 4.4
SPAC25G10.08 |||translation initiation factor eIF3b |Schizosacch... 25 5.9
SPAC1687.12c |coq4||ubiquinone biosynthesis protein Coq4|Schizos... 25 5.9
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 25 7.7
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 29.9 bits (64), Expect = 0.27
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Frame = +2
Query: 251 HLIICVHGLDGNSGDLRLVKTYLELGLPGARLDFL--MSERNQGDTFSDFDTMTDRLVQE 424
H + V+GL+G S LRL+ Y ++ + L L +S+ +T S T+ ++
Sbjct: 1453 HNKLSVNGLEGLSRLLRLLTNYFKVEIGRKLLQHLNVLSDSKVLETASLSLLKTNPRIEI 1512
Query: 425 IVT--HIQNSSEPARISFVGHSLGTIIIRSALARAQMKAYLGK-LHTFLSL 568
IV+ ++ P F+G L +++ A+ R + L K L++F+ L
Sbjct: 1513 IVSLVNVFRDLPPLSAQFLGDLLSSVVNIEAVLRKYSNSPLRKPLYSFMDL 1563
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 29.9 bits (64), Expect = 0.27
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 454 TGPNKLRGALFGDNNNQIRSSKGPNEGLFG 543
+G N G LFG NNN ++ P+ GLFG
Sbjct: 298 SGTNNASGGLFGQNNN---TTSTPSTGLFG 324
>SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein
Vps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 27.5 bits (58), Expect = 1.5
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 335 GARLDFLMSE--RNQGDTFSDFDTMTDRLVQEIVTHIQNSSEPARISFVGHSLGTIIIRS 508
GAR+ F+ E N FD + D +I T + NSS P+ F+G + +I++
Sbjct: 373 GARIAFVFHEIFSNGIQAIDPFDEVKD---SDIRTILYNSSGPSPSLFMGTAAFEVIVKQ 429
Query: 509 ALARAQ 526
+ R +
Sbjct: 430 QIKRLE 435
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 27.5 bits (58), Expect = 1.5
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -2
Query: 240 GLNILYSSLIWKYGSELSTGGKSEYIAPGYF 148
G+ ++S+++W +G LS ++ + PG F
Sbjct: 2069 GIQQIWSAILWSWGDLLSKKDLTQNVGPGIF 2099
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 347 DFLMSERNQGDTFSDFDTMTDRLVQEIVTHIQNSSEP 457
++ M+E + S F MTDR++ EI+T+ S+ P
Sbjct: 390 NYYMTEVSPQSDDSIFKLMTDRVLPEIITNRNRSTVP 426
>SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 26.2 bits (55), Expect = 3.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -2
Query: 183 GGKSEYIAPGYFTLCLNSSLHFTNSRSDSASPN 85
G +EY+ GY+ +HFT S PN
Sbjct: 67 GNYNEYLPSGYYNATDRPKIHFTPSSGFMNDPN 99
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 240 GLNILYSSLIWKYGSELSTGGKSEYIAPGYFTLCLNSSL 124
G+NI LI K+ ++ + +EY++P T+ L+ +L
Sbjct: 418 GVNIFGLPLISKFVNDAISAAANEYVSPKSMTIDLSKTL 456
>SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 723
Score = 26.2 bits (55), Expect = 3.4
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 224 YRMFNPEGLHLIICVHGLDGNSG-DLRLVKTYL 319
Y F+ + HL++ HG+ N G D+ +K L
Sbjct: 235 YSSFHSKNSHLVVLTHGMHSNVGADMEYLKEKL 267
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 392 FDTMTDRLVQEIVTHIQNSSEPARISFVGHSLGTII 499
F M DR++ VT I +S P + + HSL I+
Sbjct: 820 FGNMEDRVIIHSVTRINENSVPFNKNLLPHSLEFIL 855
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 25.8 bits (54), Expect = 4.4
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = +2
Query: 182 PVDNSLPYFHISDEYRMFNPEGLHLII--CVHGLDGNSGDLRLVKTYLELGLPGARLDFL 355
P++ S+ + +E G H+ ++G S + K +L + + G L
Sbjct: 30 PIEASVTRYRSDEEKLDDKSSGAHVTEKEAEFDIEGGSRETSQWKHFLNVAVAGVAL--- 86
Query: 356 MSERNQGDTFSDFDTMTDRLVQEIVTHIQNSSEPARISFVGHSLGTI 496
MS+ ++ T+ +L E TH ++ + I++VG +G +
Sbjct: 87 MSDGYCSNSIGTVITILRKLYPEETTHNKSLQDIGMIAYVGTIVGQL 133
>SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 431 THIQNSSEPARISFVGHSLGTIIIRSALARAQMKAYLGKLHTFL 562
T ++N +EP I+ +GH LG + L + + H FL
Sbjct: 316 TLVKNHTEPELIAILGHELGHWYMSHNLINTIIDYGMSLFHLFL 359
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 25.8 bits (54), Expect = 4.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 288 EFPSNPWTQIIRWSPSGLNILYS 220
E+PS W + +SPSG + Y+
Sbjct: 201 EYPSGGWVHAVGFSPSGNALAYA 223
>SPAC25G10.08 |||translation initiation factor eIF3b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 725
Score = 25.4 bits (53), Expect = 5.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 258 IRWSPSGLNILYSSLIWKYGSE 193
+ W PSG + SS IW++ E
Sbjct: 575 LEWDPSGRYVTTSSTIWRHKLE 596
>SPAC1687.12c |coq4||ubiquinone biosynthesis protein
Coq4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.4 bits (53), Expect = 5.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 488 PKSAPRSLFGPVRLNFECA*QFLVQVYL 405
P A +LFGP+RLN E A +F +VY+
Sbjct: 204 PVGALSALFGPLRLNCEQASRFR-RVYI 230
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 481 LFGDNNNQIRSSKGPNEGLFG 543
LFG+ NN SS P+ GLFG
Sbjct: 36 LFGNTNNNT-SSTAPSGGLFG 55
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,424,770
Number of Sequences: 5004
Number of extensions: 52369
Number of successful extensions: 132
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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