Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_H15
(568 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0417 - 3296066-3296356,3296491-3296541,3296657-3296862,329... 69 2e-12
11_01_0421 + 3236798-3237144,3237356-3237441,3237741-3237895,323... 64 6e-11
02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 57 9e-09
03_05_0980 - 29384046-29384117,29384901-29384998,29385656-293857... 50 1e-06
08_01_0298 - 2406254-2406322,2406444-2406541,2408652-2408769,240... 49 3e-06
06_01_0390 + 2802334-2802339,2802461-2802618,2802755-2802826,280... 35 0.052
04_03_0156 - 11963580-11963914,11964422-11964517,11964618-119646... 33 0.12
02_05_0176 - 26495475-26495546,26495703-26495800,26496590-264966... 32 0.28
03_03_0181 + 15162681-15162806,15164026-15164172,15164269-151643... 29 2.0
01_05_0723 + 24607800-24608357,24609616-24610158,24610281-246106... 29 2.0
08_02_0848 - 21835146-21835217,21835712-21835759,21835846-218359... 29 2.6
07_03_0204 - 15150854-15151147,15152230-15153689,15154055-151542... 29 3.4
02_05_0961 - 33103024-33103555,33107323-33107432,33107577-331077... 29 3.4
03_01_0368 + 2860640-2860855,2860959-2862203 28 6.0
01_06_0514 + 29955129-29955796,29955903-29956023 28 6.0
01_01_1067 + 8403584-8404195,8404532-8404693,8404837-8405346,840... 28 6.0
>12_01_0417 -
3296066-3296356,3296491-3296541,3296657-3296862,
3296944-3297237,3297335-3297533,3297620-3297679,
3297786-3297975,3298112-3298245,3298339-3298602,
3299158-3299344,3299476-3299540,3299622-3299776,
3300650-3300735,3301240-3301478
Length = 806
Score = 69.3 bits (162), Expect = 2e-12
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Frame = +2
Query: 257 IICVHGLDGNSGDLRLVKTYLELGLPGARLDFLMSERNQGDTFSDFDTMTDRLVQEIVTH 436
+I V+ G+ DLRLV+ L PGA + LMSE N+ T DF M RL E+V
Sbjct: 531 LIMVYKKQGHHLDLRLVRNQWLLLDPGA--ECLMSEANEDKTSGDFKEMGGRLAGEVVAF 588
Query: 437 IQNSSEPA---------RISFVGHSLGTIIIRSALARAQMKAYLGKLHTFLSL 568
++ + ++SFVGHS+G +IIR+ALA ++ YL L+T++S+
Sbjct: 589 LKKKVDKLAKYGGCKELKLSFVGHSIGNVIIRTALAEPALQPYLKNLYTYMSI 641
>11_01_0421 +
3236798-3237144,3237356-3237441,3237741-3237895,
3237971-3238035,3238180-3238363,3238785-3239048,
3239141-3239224,3239727-3239984,3240214-3240472,
3240550-3240755,3240896-3240946,3241041-3241337
Length = 751
Score = 64.5 bits (150), Expect = 6e-11
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Frame = +2
Query: 281 GNSGDLRLVKTYLELGLPGARLDFLMSERNQGDTFSDFDTMTDRLVQEIVTHIQNSSE-- 454
G+ DLRL++ L PGA + L+S+ N+ T DF M RL E+V ++ +
Sbjct: 482 GHHLDLRLIRNQWILCDPGA--ECLLSQTNEDRTCGDFKEMGRRLSNEVVAFLKRKIDRY 539
Query: 455 -------PARISFVGHSLGTIIIRSALARAQMKAYLGKLHTFLSL 568
++SFVGHS+G IIIRSALA +M+ +L L+T++S+
Sbjct: 540 SRNGGCKDLKLSFVGHSIGNIIIRSALADPKMQPFLKNLYTYMSI 584
>02_05_1006 +
33448476-33448915,33449016-33449083,33449681-33449751,
33449905-33450156,33450473-33450636,33450731-33450773,
33451044-33451161,33451384-33451481,33451550-33451594
Length = 432
Score = 57.2 bits (132), Expect = 9e-09
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +2
Query: 218 DEYRMFNPEGLHLIICVHGLDGNSGDLRLVKTYLELGLPGARLDFLMSERNQGD-TFSDF 394
+E N E HL++ V+GL G+S D + LPG ++ S+ N T+
Sbjct: 125 EEEEAGNEEADHLVVMVNGLYGSSADWKFAAEQFVKRLPG-KVFVHRSQCNHSKLTYDGV 183
Query: 395 DTMTDRLVQEIVTHIQNSSEPARISFVGHSLGTIIIRSALAR 520
D M +RL +E+ +Q S +ISFV HSLG ++ R A+ +
Sbjct: 184 DLMGERLAEEVRQVVQRRSNLQKISFVAHSLGGLVTRYAIGK 225
>03_05_0980 -
29384046-29384117,29384901-29384998,29385656-29385725,
29386260-29386391,29386823-29387083,29387266-29387336,
29387520-29387587,29388676-29388869
Length = 321
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/93 (31%), Positives = 46/93 (49%)
Frame = +2
Query: 239 PEGLHLIICVHGLDGNSGDLRLVKTYLELGLPGARLDFLMSERNQGDTFSDFDTMTDRLV 418
P HL++ V+G+ G++ + R + P + TF D M RL
Sbjct: 50 PAPTHLVVTVNGIVGSAENWRYAAKHFIKKHPEDVVVHCSGCNGAVRTFDGVDVMGTRLA 109
Query: 419 QEIVTHIQNSSEPARISFVGHSLGTIIIRSALA 517
+E+++ +Q E +ISFV HSLG +I R A+A
Sbjct: 110 EEVLSLVQRRPELQKISFVAHSLGGLIARYAIA 142
>08_01_0298 -
2406254-2406322,2406444-2406541,2408652-2408769,
2408890-2408980,2409243-2409406,2410027-2410242,
2410405-2410475,2410552-2410619,2412027-2412166
Length = 344
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/102 (28%), Positives = 48/102 (47%)
Frame = +2
Query: 215 SDEYRMFNPEGLHLIICVHGLDGNSGDLRLVKTYLELGLPGARLDFLMSERNQGDTFSDF 394
SD +P+ HL++ VHG+ G++ D + LP + + T
Sbjct: 26 SDAVSSHDPD--HLLVMVHGILGSNADWQYAANEFVKQLPDDVIVHCSEKNINTLTLEGV 83
Query: 395 DTMTDRLVQEIVTHIQNSSEPARISFVGHSLGTIIIRSALAR 520
D M +RL E++ I E +ISF+ HS+G + R A+A+
Sbjct: 84 DVMGERLADEVIDVIIRKPELTKISFLAHSVGGLAARYAIAK 125
>06_01_0390 +
2802334-2802339,2802461-2802618,2802755-2802826,
2802967-2803114,2803234-2803503,2803741-2803904,
2804184-2804236,2804302-2804496,2804597-2804694,
2804787-2804891
Length = 422
Score = 34.7 bits (76), Expect = 0.052
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 380 TFSDFDTMTDRLVQEIVTHIQNSSEPARISFVGHSLGTIIIRSALA 517
TF D RL E++ IQ + +ISF+ HSLG + R A++
Sbjct: 114 TFDGIDVAGRRLANEVLDVIQKMAGLRKISFLAHSLGGLFARYAIS 159
>04_03_0156 -
11963580-11963914,11964422-11964517,11964618-11964697,
11965250-11965290,11965402-11965548,11965922-11966035,
11968842-11968961,11969491-11969631,11969892-11970014,
11970357-11970566
Length = 468
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/47 (27%), Positives = 30/47 (63%)
Frame = +2
Query: 392 FDTMTDRLVQEIVTHIQNSSEPARISFVGHSLGTIIIRSALARAQMK 532
+D ++ + + +V ++ + + ++ +VGHSLGT+I +AL+ Q +
Sbjct: 205 WDELSSKDLSAVVQYVYSQAGQQKMHYVGHSLGTLIALAALSDQQQQ 251
>02_05_0176 -
26495475-26495546,26495703-26495800,26496590-26496691,
26496944-26496999,26497082-26497245,26497925-26497995,
26498764-26498831,26499400-26499527
Length = 252
Score = 32.3 bits (70), Expect = 0.28
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 239 PEGLHLIICVHGLDGNSGDLRLVKTYLELGLPGARLDFLMSERNQGD-TFSDFDTMTDRL 415
PE HL++ VHG+ G++ D + E L ++ S RN T D M +RL
Sbjct: 28 PEPDHLVVMVHGIVGSAADWKFGAEQFE-KLLSDKVIVHRSNRNMYKLTLDGVDVMGERL 86
Query: 416 VQEI 427
QE+
Sbjct: 87 AQEV 90
>03_03_0181 +
15162681-15162806,15164026-15164172,15164269-15164355,
15165659-15165793,15165883-15165987,15166079-15166170,
15166259-15166364,15166463-15166549,15166653-15167084
Length = 438
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 296 LRLVKTYLELGLPGARLDFLMSERNQGDTFSDFDTMTDRLVQEIVTHIQ 442
LR K Y L +P L+ + + DTF DF T RLV+ + H Q
Sbjct: 73 LRQYKNYENLTMPRDGLEKECKQVERKDTFYDFHLNT-RLVKSTIVHFQ 120
>01_05_0723 +
24607800-24608357,24609616-24610158,24610281-24610697,
24610804-24611244
Length = 652
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 407 DRLVQEIVTHIQNSSEPARISFVGHSLG 490
++L+ EI H+ E AR+ GHSLG
Sbjct: 386 EQLMPEIAAHLAAHGERARLRLTGHSLG 413
>08_02_0848 -
21835146-21835217,21835712-21835759,21835846-21835943,
21836028-21836136,21837362-21837594,21837664-21837749,
21838038-21838095,21839068-21839135,21839258-21839565
Length = 359
Score = 29.1 bits (62), Expect = 2.6
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 21/111 (18%)
Frame = +2
Query: 251 HLIICVHGLDGNSGDLRLVKTYLELGLPGARLDFLMSERNQGDTFSDFDTMTDRLVQ--- 421
HL++ V+GL G++ D + +P + + TF D M +R+
Sbjct: 92 HLVVMVNGLVGSADDWKFAAEQFVRRMPEKVIVHRSQCNSATQTFDGVDLMGERIYNYPS 151
Query: 422 --------------EIVTHIQNSSEPAR----ISFVGHSLGTIIIRSALAR 520
E V +Q E R ISFV HSLG ++ R A+ R
Sbjct: 152 DESVKSKLIYIDPWEFVFIVQTFVEQRRGVKKISFVAHSLGGLVARYAIGR 202
>07_03_0204 -
15150854-15151147,15152230-15153689,15154055-15154266,
15155123-15155275,15155569-15155630,15155733-15155785,
15156380-15156452,15156499-15156619,15156699-15156878,
15157333-15157391
Length = 888
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 152 YPGAIYSDFPPVDNSLPYFHISDEYRMFNPEGLHLIICVHGLDGNSGD 295
YPG Y +PPVD+ ++ R + + + G DG+S +
Sbjct: 336 YPGPYYPPYPPVDDPRYHYSGRKSSRKHSSDSKESEVLDEGSDGSSSE 383
>02_05_0961 -
33103024-33103555,33107323-33107432,33107577-33107707,
33107779-33107870,33108210-33108337,33108658-33108723,
33108815-33108907,33108979-33109128,33109553-33109578,
33109674-33109826,33110140-33110228,33110335-33110418,
33110564-33110598,33110702-33110842,33111045-33111128,
33111208-33111215,33111590-33111746
Length = 692
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 190 INRWEIRIYCSRIFYTLPKLLSAFYKQS 107
I+R ++RI C Y LPK + AFY++S
Sbjct: 261 IDRQDVRIVCH---YNLPKSMEAFYQES 285
>03_01_0368 + 2860640-2860855,2860959-2862203
Length = 486
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 329 LPGARLDFLMSERNQGDTFSDFDTMTDRLVQEIVTHIQNSSEPARISFVGHSLG 490
+P R D L+S R +GD+ D +L+ + ++ E + GHS+G
Sbjct: 143 VPTGRRDSLVSNREEGDSLPGPDIAVPKLMAQFSEKGFSADEMVVLLAGGHSIG 196
>01_06_0514 + 29955129-29955796,29955903-29956023
Length = 262
Score = 27.9 bits (59), Expect = 6.0
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +2
Query: 287 SGDLRLVKTYLELGLPGARLDFLMSERNQGDTFSDFDTMTDRLVQEIVTHIQNSSEPARI 466
S L ++ +LELGLP A D M + G D + L +E I++ P
Sbjct: 105 SSFLDSIRPFLELGLPKAASDAAMQKNGSGSVTLD-EIADFALSEEYTCVIEHGPNPRTT 163
Query: 467 SFVGHSLGTIIIRSALARAQMKA 535
+G T+ + + R+ K+
Sbjct: 164 HILGDE--TLEVCKGVPRSSKKS 184
>01_01_1067 +
8403584-8404195,8404532-8404693,8404837-8405346,
8405434-8405493,8405721-8406137,8406576-8407100
Length = 761
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 401 MTDRLVQEIVTHIQNSSEPARISFVGHSLG 490
M +++ + +H+++S + A + F GHSLG
Sbjct: 465 MYHQMLPYVKSHLRSSGKSATLRFTGHSLG 494
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,736,527
Number of Sequences: 37544
Number of extensions: 311354
Number of successful extensions: 714
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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