Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_H15
         (568 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002196-3|AAP68957.1|  916|Caenorhabditis elegans Hypothetical ...    58   6e-09
AF002196-2|AAP68956.1|  915|Caenorhabditis elegans Hypothetical ...    58   6e-09
AF002196-1|AAP68955.1|  913|Caenorhabditis elegans Hypothetical ...    58   6e-09
Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical pr...    30   1.3  

>AF002196-3|AAP68957.1|  916|Caenorhabditis elegans Hypothetical
            protein C09D4.4c protein.
          Length = 916

 Score = 57.6 bits (133), Expect = 6e-09
 Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
 Frame = +2

Query: 125  REEFRQSVKYPGAIYSDFP------PVDNSLPYFHISDEYRMFNPEGLHLIICVHGLDGN 286
            ++  RQ   Y G +YS+        PV   +    +  +  + +    HL++ VHGL+G+
Sbjct: 581  KKMLRQQTNYEGHLYSEQSGRSTAGPVCTPIKSSLVIGDPVVRSKNKTHLVVFVHGLEGS 640

Query: 287  SGDL---------RLVKTYLELGLPGARLD-------FLMSERNQGDTFSDFDTMTDRLV 418
              DL          +   Y  + + G   D       +LMS  N+  T++D  TM   L+
Sbjct: 641  QEDLVPFRCGLDQAIAAHYHCIQMEGRDFDEEPWAFEYLMSSANRSQTWADITTMAHNLL 700

Query: 419  QEIVTHIQNS-SEPARISFVGHSLGTIIIRSALARA---QMKAYLGKLHTFLSL 568
             E+  +++ + ++  RISF+ HSLG +I+RSA+  A   +M+  + + +T +++
Sbjct: 701  SEVREYVEEARNDIQRISFLAHSLGGVIVRSAVGLAPEVEMQWMIDRCYTLMTI 754


>AF002196-2|AAP68956.1|  915|Caenorhabditis elegans Hypothetical
            protein C09D4.4b protein.
          Length = 915

 Score = 57.6 bits (133), Expect = 6e-09
 Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
 Frame = +2

Query: 125  REEFRQSVKYPGAIYSDFP------PVDNSLPYFHISDEYRMFNPEGLHLIICVHGLDGN 286
            ++  RQ   Y G +YS+        PV   +    +  +  + +    HL++ VHGL+G+
Sbjct: 580  KKMLRQQTNYEGHLYSEQSGRSTAGPVCTPIKSSLVIGDPVVRSKNKTHLVVFVHGLEGS 639

Query: 287  SGDL---------RLVKTYLELGLPGARLD-------FLMSERNQGDTFSDFDTMTDRLV 418
              DL          +   Y  + + G   D       +LMS  N+  T++D  TM   L+
Sbjct: 640  QEDLVPFRCGLDQAIAAHYHCIQMEGRDFDEEPWAFEYLMSSANRSQTWADITTMAHNLL 699

Query: 419  QEIVTHIQNS-SEPARISFVGHSLGTIIIRSALARA---QMKAYLGKLHTFLSL 568
             E+  +++ + ++  RISF+ HSLG +I+RSA+  A   +M+  + + +T +++
Sbjct: 700  SEVREYVEEARNDIQRISFLAHSLGGVIVRSAVGLAPEVEMQWMIDRCYTLMTI 753


>AF002196-1|AAP68955.1|  913|Caenorhabditis elegans Hypothetical
            protein C09D4.4a protein.
          Length = 913

 Score = 57.6 bits (133), Expect = 6e-09
 Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
 Frame = +2

Query: 125  REEFRQSVKYPGAIYSDFP------PVDNSLPYFHISDEYRMFNPEGLHLIICVHGLDGN 286
            ++  RQ   Y G +YS+        PV   +    +  +  + +    HL++ VHGL+G+
Sbjct: 578  KKMLRQQTNYEGHLYSEQSGRSTAGPVCTPIKSSLVIGDPVVRSKNKTHLVVFVHGLEGS 637

Query: 287  SGDL---------RLVKTYLELGLPGARLD-------FLMSERNQGDTFSDFDTMTDRLV 418
              DL          +   Y  + + G   D       +LMS  N+  T++D  TM   L+
Sbjct: 638  QEDLVPFRCGLDQAIAAHYHCIQMEGRDFDEEPWAFEYLMSSANRSQTWADITTMAHNLL 697

Query: 419  QEIVTHIQNS-SEPARISFVGHSLGTIIIRSALARA---QMKAYLGKLHTFLSL 568
             E+  +++ + ++  RISF+ HSLG +I+RSA+  A   +M+  + + +T +++
Sbjct: 698  SEVREYVEEARNDIQRISFLAHSLGGVIVRSAVGLAPEVEMQWMIDRCYTLMTI 751


>Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical
           protein F46B6.8 protein.
          Length = 411

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +2

Query: 392 FDTMTDRLVQEIVTHIQNSSEPARISFVGHSLGTIIIRSALARAQMKAYLGKLHTFLSL 568
           +D M    V  +V H+   +    + ++GHS GT+I+ + LA+    ++  K+  + +L
Sbjct: 143 WDEMAQYDVPAMVDHVLAMTGQENLYYMGHSQGTLIMFTHLAKDTDGSFAKKIKRYFAL 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,106,784
Number of Sequences: 27780
Number of extensions: 283345
Number of successful extensions: 650
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)