Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_H15
         (568 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   8.6  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   8.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   8.6  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 311 TYLELGLPGARLDFLMSERNQGDTFSDFDTMTD 409
           T + L LPG  +++   E    DT+  ++   D
Sbjct: 365 TTMSLLLPGVAVNYYGDEIGMSDTYISWEDTQD 397


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 507 DLIIIVPKECPTKLIRAGSLEF 442
           D+I+ VPKE    L   G++ +
Sbjct: 704 DIILNVPKESTQSLTTTGNVSY 725


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 311 TYLELGLPGARLDFLMSERNQGDTFSDFDTMTD 409
           T + L LPG  +++   E    DT+  ++   D
Sbjct: 365 TTMSLLLPGVAVNYYGDEIGMSDTYISWEDTQD 397


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,813
Number of Sequences: 438
Number of extensions: 3801
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)