Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_H13
(563 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 224 4e-59
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 224 4e-59
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 223 6e-59
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 222 1e-58
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 221 4e-58
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 217 5e-57
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 129 4e-35
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 119 1e-27
12_02_0977 + 24999211-25000275,25000375-25000521,25000805-25001179 30 1.5
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 27 7.8
07_03_1187 + 24667044-24667091,24667196-24667274,24667520-246676... 27 7.8
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 224 bits (547), Expect = 4e-59
Identities = 106/152 (69%), Positives = 124/152 (81%)
Frame = +1
Query: 1 EKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQ 180
E EL +IC +L LL+ HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++
Sbjct: 97 ETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTM 156
Query: 181 KAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTL 360
AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL
Sbjct: 157 VAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTL 216
Query: 361 NEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 456
+E+SYKDSTLIMQLLRDNLTLWTSD D E
Sbjct: 217 SEESYKDSTLIMQLLRDNLTLWTSDISEDTAE 248
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 224 bits (547), Expect = 4e-59
Identities = 105/145 (72%), Positives = 122/145 (84%)
Frame = +1
Query: 1 EKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQ 180
E EL +IC +L LLD HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++
Sbjct: 315 ETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTM 374
Query: 181 KAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTL 360
AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL
Sbjct: 375 VAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTL 434
Query: 361 NEDSYKDSTLIMQLLRDNLTLWTSD 435
+E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 435 SEESYKDSTLIMQLLRDNLTLWTSD 459
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 223 bits (546), Expect = 6e-59
Identities = 109/156 (69%), Positives = 124/156 (79%), Gaps = 1/156 (0%)
Frame = +1
Query: 1 EKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQ 180
E EL +IC +L LLD HL+P ++ ESKVFYLKMKGDY+RYLAE TG R E +
Sbjct: 91 EAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTM 150
Query: 181 KAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTL 360
AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNSPDKAC LAKQAFD+AI+ELDTL
Sbjct: 151 VAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTL 210
Query: 361 NEDSYKDSTLIMQLLRDNLTLWTSD-TQGDGDEPAE 465
E+SYKDSTLIMQLLRDNLTLWTSD T+ GDE E
Sbjct: 211 GEESYKDSTLIMQLLRDNLTLWTSDLTEDGGDEVKE 246
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 222 bits (543), Expect = 1e-58
Identities = 104/152 (68%), Positives = 120/152 (78%)
Frame = +1
Query: 1 EKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQ 180
E EL IC +L LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+ R E +
Sbjct: 74 EAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTM 133
Query: 181 KAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTL 360
AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD+L
Sbjct: 134 NAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSL 193
Query: 361 NEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 456
E+SYKDSTLIMQLLRDNLTLWTSD DG +
Sbjct: 194 GEESYKDSTLIMQLLRDNLTLWTSDANDDGGD 225
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 221 bits (539), Expect = 4e-58
Identities = 106/152 (69%), Positives = 121/152 (79%)
Frame = +1
Query: 1 EKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQ 180
E EL +IC +L LLD HL+P A+ ESKVFYLKMKGDY+RYLAE +G R E++
Sbjct: 96 ETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTL 155
Query: 181 KAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTL 360
AY+ A +I+ A + THPIRLGLALNFSVFYYEILNSPD+AC LAKQAFDDAIAELDTL
Sbjct: 156 VAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTL 215
Query: 361 NEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 456
E+SYKDSTLIMQLLRDNLTLWTSD DG +
Sbjct: 216 GEESYKDSTLIMQLLRDNLTLWTSDNAEDGGD 247
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 217 bits (530), Expect = 5e-57
Identities = 103/152 (67%), Positives = 121/152 (79%)
Frame = +1
Query: 1 EKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQ 180
E EL IC +L LLD+ L+P A+ ++KVFYLKMKGDY+RYLAE TG R + +
Sbjct: 101 EAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATL 160
Query: 181 KAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTL 360
AYQ A +I+ ++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL
Sbjct: 161 AAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTL 220
Query: 361 NEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 456
E+SYKDSTLIMQLLRDNLTLWTSD Q DG +
Sbjct: 221 GEESYKDSTLIMQLLRDNLTLWTSDMQDDGGD 252
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 129 bits (312), Expect(2) = 4e-35
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +1
Query: 196 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 375
A + ++ + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205
Query: 376 KDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 474
KDSTLIMQLLRDNL LW SD D D+ E D
Sbjct: 206 KDSTLIMQLLRDNLALWNSDMADDADDIRERTD 238
Score = 36.3 bits (80), Expect(2) = 4e-35
Identities = 25/64 (39%), Positives = 32/64 (50%)
Frame = +1
Query: 1 EKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQ 180
E E+ +IC DV+ ++DK KGDYYRYLAE TG + V E S
Sbjct: 68 EAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGTEKIEVSELSL 109
Query: 181 KAYQ 192
AY+
Sbjct: 110 NAYE 113
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 119 bits (287), Expect = 1e-27
Identities = 65/148 (43%), Positives = 95/148 (64%)
Frame = +1
Query: 1 EKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQ 180
E ELR +C +VL ++ H +P A++ E+ VF+ KMKGDYYRYLAE +TG + + + S
Sbjct: 88 EDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSL 147
Query: 181 KAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTL 360
AYQ A+ ++ FS+ EI+NSP++A Q+AKQA D+A AE+++
Sbjct: 148 MAYQ-AWPCAQL---------------FSLL--EIMNSPERASQVAKQALDEATAEINSA 189
Query: 361 NEDSYKDSTLIMQLLRDNLTLWTSDTQG 444
+ YKDS L+MQLL++NL LWTS+ G
Sbjct: 190 GVEGYKDSMLMMQLLKENLALWTSELTG 217
>12_02_0977 + 24999211-25000275,25000375-25000521,25000805-25001179
Length = 528
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +1
Query: 37 CLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETR-HSV----VEDSQKAYQDAF 201
C+L+ +I + +PES++ L + +A VA TR S+ ++ A DA
Sbjct: 252 CVLEPGMIERVLHPESEIRELAIHSAMGGTIAVVAAAATRLRSLRMFNIQVGTVAVDDAV 311
Query: 202 EISKAKMQPTHPIRLGL 252
E+ M+ T P R+ +
Sbjct: 312 ELRNLHMRDTRPSRIAI 328
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +1
Query: 7 ELREICYDVLCLLDKHLIPKASNPES-----KVFYLKMKG 111
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>07_03_1187 +
24667044-24667091,24667196-24667274,24667520-24667695,
24668216-24668766,24669080-24669941
Length = 571
Score = 27.5 bits (58), Expect = 7.8
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = -3
Query: 276 IEDGEI*RQTQPYWVCGLHFCLADLKSILVCFL*ILYNRMSGFSCGHFCEIPVVISLHFE 97
+E+ +I + P W G+ FC+ + + F I + G IP FE
Sbjct: 332 VEELKILIRLLPIWATGIFFCVG-ISQMHTTF--IQQGTVMNTKIGSL-SIPAASLYSFE 387
Query: 96 VKYFTFWITSFRYKVLVQ*TQDIIADFSEL 7
V TFW+ KV++ T+ A+ +E+
Sbjct: 388 VICVTFWVFLVN-KVIIPVTRACFANGAEM 416
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,336,782
Number of Sequences: 37544
Number of extensions: 251757
Number of successful extensions: 758
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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