Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_H09
(513 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 9e-24
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 68 4e-12
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 66 1e-11
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 58 4e-09
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 52 4e-07
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 48 5e-06
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 48 6e-06
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 46 1e-05
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 46 2e-05
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 40 0.001
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 38 0.006
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 36 0.015
SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.079
SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26) 34 0.079
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 32 0.24
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 31 0.56
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 31 0.56
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056) 30 0.97
SB_13154| Best HMM Match : DnaJ (HMM E-Value=7.9e-11) 29 2.2
SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_6406| Best HMM Match : Mis12 (HMM E-Value=0.49) 29 3.0
SB_38536| Best HMM Match : 7tm_1 (HMM E-Value=4.7e-23) 28 3.9
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031) 28 3.9
SB_2864| Best HMM Match : ATP-synt_8 (HMM E-Value=1.2) 28 5.2
SB_57955| Best HMM Match : Ribosomal_L41 (HMM E-Value=5) 28 5.2
SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_38350| Best HMM Match : OCIA (HMM E-Value=6.7) 27 9.1
SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2) 27 9.1
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 106 bits (255), Expect = 9e-24
Identities = 61/167 (36%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Frame = +2
Query: 14 KKKLS*TSKRIHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDKYXXXXXXXXXXXXXFP 193
KK + + HPDKNP GD+FK+IS AYEVLSD KKR+ YD+ F
Sbjct: 82 KKSYRKLALKYHPDKNPDEGDRFKQISQAYEVLSDEKKRKIYDEGGEDAIKGGGEGGGFH 141
Query: 194 AD-DLFGHFFGDIFXXXXXXXXXXXXXXEDTMHPLKVTLEDMYMGKTTKLQLSKNXXXXX 370
+ D+F FFG +D +H L+VTLE++Y G T +L L KN
Sbjct: 142 SPMDIFDMFFG-----TGRAAHQGERRGKDMVHQLRVTLEELYNGATRQLALQKNVICSK 196
Query: 371 XXXXXXXXXSAVTCEYCHGQGIRVSYQQIAPQMTRQFQQRCPVCEGQ 511
+C+ CHG G+ V +IAP M +Q Q C C G+
Sbjct: 197 CDGRGGKEGCVESCQTCHGSGMYVRINRIAPGMVQQIQTVCRDCGGK 243
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +2
Query: 14 KKKLS*TSKRIHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDKYXXXXXXXXXXXXXFP 193
KK +K +HPDKNP G+KFK+I++AYE+LSDP+KR+ YD+Y
Sbjct: 22 KKAYRKLAKELHPDKNPDTGEKFKDITFAYEILSDPEKRELYDRYGEKGLREGAGGGA-G 80
Query: 194 ADDLFGHFFG 223
+D+ H FG
Sbjct: 81 FEDILSHIFG 90
Score = 36.3 bits (80), Expect = 0.015
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 410 CEYCHGQGIRVSYQQIAPQMTRQFQQRCPVCEGQ 511
C C G+G++V+ + I P M +Q Q C C G+
Sbjct: 138 CAGCKGRGVKVTIKPIGPGMVQQMQSMCHDCSGE 171
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 66.5 bits (155), Expect = 1e-11
Identities = 26/45 (57%), Positives = 36/45 (80%)
Frame = +2
Query: 14 KKKLS*TSKRIHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDKY 148
KK +K +HPDKNP G+KFK+I++AYE+LSDP+KR+ YD+Y
Sbjct: 22 KKAYRKLAKELHPDKNPDTGEKFKDITFAYEILSDPEKRELYDRY 66
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 58.0 bits (134), Expect = 4e-09
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Frame = +2
Query: 14 KKKLS*TSKRIHPDKN--PAAGDKFKEISYAYEVLSDPKKRQTYDKY 148
KK + + HPDKN P A +KFKEIS AYEVLSDPKK++ YD+Y
Sbjct: 21 KKAYRKQALKYHPDKNKSPGAEEKFKEISEAYEVLSDPKKKEIYDQY 67
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Frame = +2
Query: 14 KKKLS*TSKRIHPDKN--PAAGDKFKEISYAYEVLSDPKKRQTYDKY 148
KK + + HPDKN P A +KFKEI+ AYEVLSDP+KR+ +D+Y
Sbjct: 21 KKAYKKQAFKYHPDKNKDPGAEEKFKEIAEAYEVLSDPQKREIFDQY 67
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 51.6 bits (118), Expect = 4e-07
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Frame = +2
Query: 14 KKKLS*TSKRIHPDKNPA----AGDKFKEISYAYEVLSDPKKRQTYDKY 148
KK + R HPDKNP A +KFK++S AYEVLSD +KR YDKY
Sbjct: 21 KKAYRRQALRWHPDKNPTNREHAEEKFKKLSEAYEVLSDKEKRDIYDKY 69
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 50.8 bits (116), Expect = 6e-07
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +2
Query: 14 KKKLS*TSKRIHPD--KNPAAGDKFKEISYAYEVLSDPKKRQTYDKYXXXXXXXX----X 175
KK +K+ HPD K+ +A +KF+E+S AYEVLSD KR+ YD +
Sbjct: 76 KKAYFELAKKYHPDTNKDKSASEKFQEVSEAYEVLSDDGKRKAYDSFGQTDFSGAQGGPF 135
Query: 176 XXXXFPADDLFGHFFG 223
F A+D+ FFG
Sbjct: 136 GGAGFDAEDILKSFFG 151
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2
Query: 41 RIHPDKNPAAGDKFKEISYAYEVLSDPKKRQTYDK 145
+ HPDKN + FKE+S AYEVL DP++R+ +DK
Sbjct: 30 KYHPDKNAGTEENFKEVSEAYEVLCDPQQRERFDK 64
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Frame = +2
Query: 14 KKKLS*TSKRIHPDKN--PAAGDKFKEISYAYEVLSDPKKRQTYDKY 148
KK+ S + HPDKN P+A KF++ + AY+VLSDPKKR Y+++
Sbjct: 21 KKEYRKLSLKYHPDKNQEPSAEVKFRQAAEAYDVLSDPKKRAIYNQF 67
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 47.6 bits (108), Expect = 6e-06
Identities = 21/36 (58%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
Frame = +2
Query: 47 HPDKNPAAG--DKFKEISYAYEVLSDPKKRQTYDKY 148
HPDKN +G +KFKEIS AY+VL+DP++R +D Y
Sbjct: 32 HPDKNKNSGAEEKFKEISEAYKVLTDPRQRDIFDMY 67
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +2
Query: 14 KKKLS*TSKRIHPDKNPA--AGDKFKEISYAYEVLSDPKKRQTYDKY 148
KK + + HPDKN A +KF+E++ AYEVLSD KR+ YD++
Sbjct: 43 KKAFRKMAVKYHPDKNKGKDAEEKFREVAEAYEVLSDENKRRQYDQF 89
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Frame = +2
Query: 41 RIHPDKN---PAAGDKFKEISYAYEVLSDPKKRQTYD-KYXXXXXXXXXXXXXFPADDLF 208
++HPDKN P A +KF +I AYEVL+D +R+ YD + P F
Sbjct: 51 KLHPDKNKDDPKAQEKFHDIGAAYEVLADDDQRKIYDQRGEEGLKNAGHRDHSDPFSSFF 110
Query: 209 GHFFGDIFXXXXXXXXXXXXXXEDTMHPLKVTLEDMYMG 325
G F D L+VTLE++Y G
Sbjct: 111 GGFGFHFDGHNGHSHSQQVPRGSDLTVDLEVTLEELYNG 149
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +2
Query: 14 KKKLS*TSKRIHPDKNPAAGDK--------FKEISYAYEVLSDPKKRQTYDKYXXXXXXX 169
KK + + HPD++ A D+ FKE++ AY +LSDPKK++ YD
Sbjct: 176 KKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILSDPKKKRRYD--SGQDLEE 233
Query: 170 XXXXXXFPADDLFGHFFG 223
F + +F FFG
Sbjct: 234 GYGMDDFDPNSIFQAFFG 251
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +2
Query: 14 KKKLS*TSKRIHPDKNPAAGDK--------FKEISYAYEVLSDPKKRQTYDKYXXXXXXX 169
KK + + HPD++ A D+ FKE++ AY +LSDPKK++ YD
Sbjct: 176 KKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILSDPKKKRRYD--SGQDLEE 233
Query: 170 XXXXXXFPADDLFGHFFG 223
F + +F FFG
Sbjct: 234 GYGMDDFDPNSIFQAFFG 251
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 4/38 (10%)
Frame = +2
Query: 47 HPDKNPAAGDK----FKEISYAYEVLSDPKKRQTYDKY 148
HPDKN ++ F+EI AY+VLSDP++R YDK+
Sbjct: 32 HPDKNLDNAEESTRVFREIQQAYDVLSDPQERAFYDKH 69
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/39 (56%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Frame = +2
Query: 14 KKKLS*TSKRIHPDKNPA----AGDKFKEISYAYEVLSD 118
KK + + HPDKNP A KFKEIS AYEVLSD
Sbjct: 20 KKSYRKLALKWHPDKNPQNKEEAERKFKEISEAYEVLSD 58
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +2
Query: 41 RIHPDKNP---AAGDKFKEISYAYEVLSDPKKRQTYD 142
+ HPDKNP A + F ++S A EVL+DPK R ++
Sbjct: 33 KCHPDKNPDNPKASELFHKLSKALEVLTDPKARAAFN 69
>SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 33.9 bits (74), Expect = 0.079
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Frame = +2
Query: 35 SKRIHPDKNPAAGDKFK---EISYAYEVLSDPKKRQTYDKYXXXXXXXX---XXXXXFPA 196
+K HPD NP D K ++S AY LS +RQ YD + +
Sbjct: 32 TKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSARRQQYDARLNSSFASTYRPATASTYSS 91
Query: 197 DDLFGHFFGD 226
FGH G+
Sbjct: 92 SSPFGHRDGE 101
>SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26)
Length = 211
Score = 33.9 bits (74), Expect = 0.079
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Frame = +2
Query: 35 SKRIHPDKNPAAGDKFK---EISYAYEVLSDPKKRQTYDKYXXXXXXXX---XXXXXFPA 196
+K HPD NP D K ++S AY LS +RQ YD + +
Sbjct: 93 TKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSARRQQYDARLNSSFASTYRPATASTYSS 152
Query: 197 DDLFGHFFGD 226
FGH G+
Sbjct: 153 SSPFGHRDGE 162
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 35 SKRIHPDKNPAAGDKFKEISYAYEVLSDPKK 127
SK+ HPDK KF I+ AYE +SD K
Sbjct: 1272 SKKYHPDKETGDPRKFMRIAKAYEAVSDFNK 1302
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +2
Query: 35 SKRIHPDKNPAAGDK---FKEISYAYEVLSDPKKRQTYDK 145
S + HPD++ + K F+EI+ AY VL + + R+ YD+
Sbjct: 96 SMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRKQYDR 135
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 35 SKRIHPDKNPA--AGDKFKEISYAYEVLSDPKKRQTYD 142
S ++HPD+N A KF+++ EVL D KR+ YD
Sbjct: 2507 SLQLHPDRNKEDDAELKFRKLVAVAEVLKDEDKRKRYD 2544
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +2
Query: 35 SKRIHPDKNPAAGDK---FKEISYAYEVLSDPKKRQTYDK 145
S + HPD++ + K F+EI+ AY VL + + R+ YD+
Sbjct: 96 SMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRKQYDR 135
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Frame = +2
Query: 35 SKRIHPDK-----NPAAGDKFKEISYAYEVLSDPKKRQTYDK 145
S ++HPD+ A KF+ +S +Y +LSD +KR YD+
Sbjct: 39 SLQVHPDRADKGEKEKATRKFQALSKSYCILSDKEKRAIYDE 80
>SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056)
Length = 219
Score = 30.3 bits (65), Expect = 0.97
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 53 DKNPAAGDKFKEISYAYEVLSDPKKRQTYD 142
D A KF+ I+ AYE L DP++R YD
Sbjct: 74 DDKENAIKKFQLIATAYETLKDPEQRNDYD 103
>SB_13154| Best HMM Match : DnaJ (HMM E-Value=7.9e-11)
Length = 340
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 47 HPDKNPAAGDKFKEISYAYEVLSDPKKRQTYD 142
HPDKN ++ + I AY L D + R Y+
Sbjct: 167 HPDKNGGDAEQARNIIMAYSCLEDDETRARYN 198
>SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1319
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 3 ESEIKRSYHKLAKESTLIKILQLETNSKKLATLTRCC 113
+S ++ S+ ++ + L L N++KLAT + CC
Sbjct: 462 QSYLRESWQTCVNQNKKVPALLLRDNNRKLATSSMCC 498
>SB_6406| Best HMM Match : Mis12 (HMM E-Value=0.49)
Length = 714
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 180 VEASLQMTCLDISLVIYLAWGVEAEPAGQLVVKTQCTL*KLLWKICIWVKQP 335
+ +SL +TC I+ I+LA P V L ++ ++ +W+ +P
Sbjct: 593 MSSSLGVTCSPITWTIWLACRTRGMPVYTAFVMQHSKLCSMIRRLAVWIVEP 644
>SB_38536| Best HMM Match : 7tm_1 (HMM E-Value=4.7e-23)
Length = 389
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 313 YVYG*NNQTTV-K*KCYLWSL*RSWRKTGISCDL*ILSWARY 435
Y+YG ++ K C++W+L SW T +L ++W RY
Sbjct: 36 YLYGYDSAWIFGKAMCHMWTLASSWFATASIFNLCAVTWDRY 77
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Frame = +2
Query: 47 HPDKNPAAGDK-----FKEISYAYEVLSDPKKRQTYD 142
HPD K F +I+ A EVL+DP+KR YD
Sbjct: 236 HPDNYKGEDKKKAEKMFIDIAAAKEVLTDPEKRAKYD 272
>SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)
Length = 1099
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Frame = -2
Query: 254 LCFHPPCQIYHQRNVQTSHLQGSLH----LDHLPEVLSNR---IYHK-SVVF 123
+ +HPP +IYH+ ++ +H + H P V+ +R +YH+ S+VF
Sbjct: 306 IIYHPPPEIYHRPDIVVHRAPIMIHRAPIIYHQPPVVVHRPAIVYHQPSIVF 357
>SB_2864| Best HMM Match : ATP-synt_8 (HMM E-Value=1.2)
Length = 250
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +3
Query: 3 ESEIKRSYHKLAKESTLIKILQLETNSKKLATLTRCCPILK-----NDRLMINTV 152
+SE+ R + K S LI++L L + + RCC +L+ DR +I T+
Sbjct: 156 KSEVLRLRIVIKKPSRLIEVLALALTHRPPQSPRRCCTVLREVQCPQDRFVIATI 210
>SB_57955| Best HMM Match : Ribosomal_L41 (HMM E-Value=5)
Length = 404
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 180 VEASLQMTCLDISLVIYLAWGVEAEPAGQLVVKTQCTL*KLLWKICIWVKQP 335
+ +SL +TC I+ I+LA P V L ++ ++ +W+ +P
Sbjct: 282 MSSSLGVTCSPITWTIWLACRTREMPVYTAFVMQHSKLWSMVRRLAVWIVEP 333
>SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -2
Query: 281 CLHHELARGLCFHPPCQIYHQRNVQTSHLQGSLHLDH 171
C H ++A L PC H T L+ H DH
Sbjct: 706 CEHLDIANTLLLRTPCYCEHPAIANTLPLRSPCHCDH 742
>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 387 PPTPLQGPQ-ITFLLNCSLVVLPIYISSKVTF 295
PP PL ITFLLN L P+ SS +TF
Sbjct: 482 PPQPLPSSSAITFLLNHYLPPQPLPSSSTITF 513
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 387 PPTPLQ-GPQITFLLNCSLVVLPIYISSKVTF 295
PP PL ITFLLN L P+ SS +TF
Sbjct: 520 PPQPLPFSSAITFLLNHYLPPQPLPSSSTITF 551
>SB_38350| Best HMM Match : OCIA (HMM E-Value=6.7)
Length = 537
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 230 IYHQRNVQTSHLQGSLHLDHLPEVLSNRI 144
IYH R++ T +L SL H+ + SNRI
Sbjct: 49 IYHYRSIITLYLFSSLTDGHVRSMTSNRI 77
>SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2)
Length = 356
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Frame = -2
Query: 254 LCFHPPCQIYHQRNVQTSHLQGSLH----LDHLPEVLSNR---IYHK-SVVF 123
+ +HPP ++YH+ ++ LH + H P V+ +R IYH+ +VF
Sbjct: 157 IIYHPPPEVYHRPDIVVHRAPIMLHRPAIIYHQPPVVVHRPAIIYHQPPIVF 208
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,987,957
Number of Sequences: 59808
Number of extensions: 279819
Number of successful extensions: 662
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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