Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_H05
         (393 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q66I06 Cluster: Zgc:92115; n=5; Danio rerio|Rep: Zgc:92...    32   3.4  
UniRef50_UPI0000DD86FE Cluster: PREDICTED: hypothetical protein;...    31   6.0  
UniRef50_Q914K0 Cluster: Putative uncharacterized protein SIFV00...    31   7.9  
UniRef50_Q388N0 Cluster: Putative uncharacterized protein; n=2; ...    31   7.9  
UniRef50_A4H8Y7 Cluster: Putative uncharacterized protein; n=2; ...    31   7.9  

>UniRef50_Q66I06 Cluster: Zgc:92115; n=5; Danio rerio|Rep: Zgc:92115
           - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 191

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   ITYDCRSEVSGSIPGSGQVI*GFFYSVSSRSLEFV 107
           IT +C      ++PGSGQ + G  YSV  + LEF+
Sbjct: 44  ITGECNIPFLLNVPGSGQRVYGEIYSVDQKMLEFL 78


>UniRef50_UPI0000DD86FE Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 268

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -1

Query: 177 TTHISPSLVPSQM*QGASLSPYRAQIPNSGMILSRKNPISLDPTRGSNPRPQNG 16
           +T ++P   P     GA L+P     P++ + LS     S+D T G  P PQ+G
Sbjct: 209 STDLTPGRGPDPQ-HGADLTPSMDLTPSTDLTLSTDLTPSMDLTPGRGPDPQHG 261


>UniRef50_Q914K0 Cluster: Putative uncharacterized protein SIFV0030;
           n=1; Sulfolobus islandicus filamentous virus|Rep:
           Putative uncharacterized protein SIFV0030 - Sulfolobus
           islandicus filamentous virus
          Length = 265

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 312 RFVFNVFRYTNMFRNSLRFNLIYTYIHMLT 223
           R  FN  RY+ M  +++ FN++YTY   LT
Sbjct: 208 RVYFNYLRYSVMKEDAVHFNVLYTYKKSLT 237


>UniRef50_Q388N0 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 684

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 213 PYGLGRGEIANYTTHISPSLVPSQM*QGASLSPYRAQIPN 94
           PY L  GE+    +H+ P +    +  G S S   +QIPN
Sbjct: 600 PYSLNSGEMVTRVSHLQPGVYEGLIEVGRSRSKRTSQIPN 639


>UniRef50_A4H8Y7 Cluster: Putative uncharacterized protein; n=2;
            cellular organisms|Rep: Putative uncharacterized protein
            - Leishmania braziliensis
          Length = 1768

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -1

Query: 168  ISPSLVPSQM*QGASLSPY--RAQIPNSGMILSRKNPISLDPT 46
            +SPS VPSQ+ Q  S  P+  R + P SG   S   P+S+ PT
Sbjct: 1281 LSPSQVPSQLDQWNSRVPFTRRGRPPTSGANYSSSIPMSVLPT 1323


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,087,060
Number of Sequences: 1657284
Number of extensions: 8019854
Number of successful extensions: 16108
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16101
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)