Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_H03
         (535 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    54   1e-09
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.5  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   4.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   4.5  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   7.9  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   7.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 53.6 bits (123), Expect = 1e-09
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
 Frame = +2

Query: 131 ESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAA 310
           +S N  CG ++   ++IVGG +T I ++P +  I+  +++   ++CG ++IS +YVLTAA
Sbjct: 147 DSTNCNCGWKNP--SRIVGGTNTGINEFPMMAGIK-RTYEP-GMICGATIISKRYVLTAA 202

Query: 311 HCVTGAILIEGTPK-NVRLGEYNTTNNGPDCMKGTKDCAHPVVTAPIEKTIPHPDY--IP 481
           HC    I+ E T K  + +GE++ +         +K   +  V   I K I HP Y  I 
Sbjct: 203 HC----IIDENTTKLAIVVGEHDWS---------SKTETNATVLHSINKVIIHPKYDIIE 249

Query: 482 NDVQGRHDIALIR 520
            D    +DIAL++
Sbjct: 250 KDDWQINDIALLK 262


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -1

Query: 307 SSEHVLRTDE*ATA*QLHMIKTLIFDHHKPWILGDFCV-ISTDNFINN 167
           +S H+L   +  T+  L+ +    +DH K  ++G F +  S D+  NN
Sbjct: 24  NSVHILSKYQLITSTTLNWLPRTHYDHLKEIVIGGFEIEKSEDDSFNN 71


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -2

Query: 192  FPPTILLTTVSSTPQHSLLLSSGKAVTALEHLSLRVISSGFISGGGPQH 46
            F P +LL      P+   + SS        HL++ V+      G GP H
Sbjct: 883  FAPLLLLHLTPLQPRFYSISSSPDVHQGQIHLTVAVVQYKTQDGFGPIH 931


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 298 AHCCTLCHWSNLD 336
           AHC  LCH  + D
Sbjct: 741 AHCFALCHCCDFD 753


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 432 TGCAQSLVPFMQSGP 388
           +GC Q LVP +Q  P
Sbjct: 293 SGCLQFLVPMLQGFP 307


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 432 TGCAQSLVPFMQSGP 388
           +GC Q LVP +Q  P
Sbjct: 261 SGCLQFLVPMLQGFP 275


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 393 GPLFVVLYSPKRTFFGVPSI 334
           GPLF  +Y+   + FG  SI
Sbjct: 121 GPLFCQIYAMLGSLFGCGSI 140


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 393 GPLFVVLYSPKRTFFGVPSI 334
           GPLF  +Y+   + FG  SI
Sbjct: 87  GPLFCQIYAMLGSLFGCGSI 106


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -2

Query: 237 YSITTSHGYWVIFVSFPPTILLTTVSSTPQHSLLLSSGKAVT 112
           Y   T+HGY +   S     +L    ST +  ++   GKA +
Sbjct: 795 YPSQTTHGYDIYASSIDKENILFLDLSTGKVEMITGVGKATS 836


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,670
Number of Sequences: 438
Number of extensions: 4189
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)