Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_H03
(535 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g23600.1 68415.m02816 hydrolase, alpha/beta fold family prote... 29 1.9
At1g28520.1 68414.m03506 expressed protein 29 1.9
At2g23590.1 68415.m02815 hydrolase, alpha/beta fold family prote... 29 2.6
At3g46960.1 68416.m05099 DEAD/DEAH box helicase, putative simila... 28 4.5
At5g48010.1 68418.m05933 pentacyclic triterpene synthase, putati... 27 5.9
At4g33380.1 68417.m04745 expressed protein 27 5.9
At4g14900.1 68417.m02288 hydroxyproline-rich glycoprotein family... 27 7.9
At3g16620.1 68416.m02124 chloroplast outer membrane protein, put... 27 7.9
At3g51350.1 68416.m05622 aspartyl protease family protein contai... 23 8.7
>At2g23600.1 68415.m02816 hydrolase, alpha/beta fold family protein
similar to ethylene-induced esterase [Citrus sinensis]
GI:14279437, polyneuridine aldehyde esterase [Rauvolfia
serpentina] GI:6651393; contains Pfam profile PF00561:
hydrolase, alpha/beta fold family
Length = 263
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 203 ITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTA 307
I YP +VIE E DHM + C L+S + A
Sbjct: 225 IHNYPANLVIEMEETDHMPMFCKPQLLSDHLLAIA 259
>At1g28520.1 68414.m03506 expressed protein
Length = 486
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 323 GAILIEGTPKNVRLGEYNTTNNGPDCMKGTKDCAHPVVTAPIEKTI 460
G + E P+N NTTNN C+KG + V T ++ T+
Sbjct: 419 GRLTAEFPPEN---NTTNTTNNNKRCIKGRPKVSTKVATGNVQNTV 461
>At2g23590.1 68415.m02815 hydrolase, alpha/beta fold family protein
similar to ethylene-induced esterase [Citrus sinensis]
GI:14279437, polyneuridine aldehyde esterase [Rauvolfia
serpentina] GI:6651393; contains Pfam profile PF00561:
hydrolase, alpha/beta fold family
Length = 272
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 203 ITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTA 307
I YP +VIE E DH+ L C L+S + A
Sbjct: 234 IDNYPPNLVIEMEGTDHLPLFCKPQLLSDHLLAIA 268
>At3g46960.1 68416.m05099 DEAD/DEAH box helicase, putative similar
to SP|P35207 Antiviral protein SKI2 {Saccharomyces
cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 1347
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 410 TKDCAHPVVTAPIEKTIPHPDYIPNDVQGRHDIALI 517
TK C V TAPI KTI + Y D G+ D+ L+
Sbjct: 391 TKHCTRAVYTAPI-KTISNQKY--RDFCGKFDVGLL 423
>At5g48010.1 68418.m05933 pentacyclic triterpene synthase, putative
similar to pentacyclic triterpene synthase [gi:6650207]
[PMID: 11247608] Contains Pfam domain PF00432:
Prenyltransferase and squalene oxidase repeat
Length = 758
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 514 KRNVMSALHIVGDVIWMWNSFFYRSSNNGMCTVFGTFHAVRTIV 383
KR + A + D+ + S++ N G+C ++GTF AVR +V
Sbjct: 586 KRFITKAAKYIEDMQTVDGSWY---GNWGVCFIYGTFFAVRGLV 626
>At4g33380.1 68417.m04745 expressed protein
Length = 328
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +1
Query: 259 AAMRW-LTHQFEVRAHCCTLC 318
AA+RW LTH E A CC C
Sbjct: 229 AAVRWGLTHHKESAADCCQAC 249
>At4g14900.1 68417.m02288 hydroxyproline-rich glycoprotein family
protein
Length = 532
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -2
Query: 351 FGVPSIKIAPVTQCAAVSTYFELMSEPPHSSFI*SKLSYSITTSHGYWVIFVSFPP 184
+GVP+ +P T + S ++ E H S+ S +SY T++G + V+ PP
Sbjct: 460 YGVPAYTTSPPTIYSNRSPPYQYSPEAVHGSYQTSPVSY--PTAYGTYCSPVAAPP 513
>At3g16620.1 68416.m02124 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1089
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 23 NGPETFSVCCGPPPEINPEDMTLNERCSRAVTAFPLESNNECCGVEDTVVNK 178
N E F G + PE + + FPL SN+E C +E+T N+
Sbjct: 36 NEEEVFEEAIGSQEGLKPESL----KTDVLQEDFPLASNDEVCDLEETSRNE 83
>At3g51350.1 68416.m05622 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 528
Score = 23.4 bits (48), Expect(2) = 8.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 59 PPEINPEDMTLNERCSRAVTAFPLES 136
PP INP + T N A PL S
Sbjct: 491 PPPINPRNSTGNPGTGGAANLIPLAS 516
Score = 21.8 bits (44), Expect(2) = 8.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 8 RQSVCNGPETFSVCCGPPPEI 70
+QS+C E+ PPPE+
Sbjct: 448 KQSLCFEDESLESTTPPPPEV 468
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,764,147
Number of Sequences: 28952
Number of extensions: 281810
Number of successful extensions: 776
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 984125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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