Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G24
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0118 - 8486986-8488925,8488971-8489041,8489884-8490728 30 1.1
04_04_0837 + 28547815-28547970,28548073-28548783 30 1.1
02_02_0179 + 7500647-7500779,7503021-7503222,7503356-7503427,750... 30 1.1
07_01_0263 - 1960935-1961174,1961293-1961328 30 1.4
06_01_0497 + 3555919-3557154,3557815-3558143,3558177-3558775,355... 30 1.4
01_05_0422 - 22018579-22018698,22019548-22019644,22019744-220199... 29 2.5
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 29 3.3
01_01_0942 + 7428384-7429536,7429623-7430335 29 3.3
02_04_0576 + 24009297-24009980,24010062-24010376 28 4.3
01_06_1160 - 34996840-34996979,34997316-34997478,34997970-349983... 28 4.3
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 28 5.7
08_02_0574 - 18867623-18868033,18869751-18870209 28 5.7
02_04_0203 - 20888010-20888162,20888242-20888469,20888969-208890... 28 5.7
02_01_0213 + 1416721-1417440 28 5.7
01_06_1057 - 34142979-34143114,34143212-34143390,34143496-341436... 28 5.7
06_03_0854 + 25400855-25403741,25406174-25407708 27 7.5
05_03_0475 + 14486969-14487140,14487215-14487338,14487424-144875... 27 7.5
04_01_0360 - 4720997-4721812 27 7.5
02_01_0582 + 4315336-4315956,4316060-4316188,4316282-4316581 27 7.5
12_02_0989 - 25069052-25070134 27 10.0
07_01_0462 - 3497340-3497632,3497713-3497772,3497851-3498405,349... 27 10.0
04_04_0386 + 24865344-24865973,24866068-24866439 27 10.0
04_04_0353 - 24623452-24623691,24623871-24624134,24624264-24624449 27 10.0
03_05_0292 + 22846273-22846377,22847161-22847823 27 10.0
03_02_0663 + 10256898-10258915,10259162-10259248,10259463-102597... 27 10.0
02_04_0545 + 23778769-23779245,23779395-23779688 27 10.0
01_05_0126 - 18391879-18391937,18392021-18392102,18392508-183926... 27 10.0
>11_02_0118 - 8486986-8488925,8488971-8489041,8489884-8490728
Length = 951
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 330 ELFPIRAPLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRCDEFIDDL*H 509
E+ ++ L S+ + D D D I + EW ++ Y++ED D+FI +
Sbjct: 34 EILTMKLELQSMNAFLLKLADMDDLD----IQVKEWRNQIRELSYDIEDCIDDFIHQMDG 89
Query: 510 GALRILRSY 536
G+ R+ + +
Sbjct: 90 GSSRVHKGF 98
>04_04_0837 + 28547815-28547970,28548073-28548783
Length = 288
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +2
Query: 5 GVPTALPL---PRPLGAVPR-GAVPPR-ADRVLRDLQGNAGVQRERNVRLPAAHARLA 163
G+PTA+P+ P G P + PPR A + + G E N RL +ARLA
Sbjct: 98 GIPTAIPISSPPTSSGGEPAVSSSPPRGAAGIAAGVSGAVAELEEENARLRRENARLA 155
>02_02_0179 +
7500647-7500779,7503021-7503222,7503356-7503427,
7503655-7503726,7504212-7504283,7504711-7504782,
7505045-7505116,7505209-7505280,7505688-7505759,
7506215-7506292,7506670-7506729,7506810-7506848,
7506949-7506998,7507110-7507480,7508467-7508662,
7508856-7508936,7509694-7509848,7510302-7510512,
7510648-7510882,7510995-7511145,7511813-7512181
Length = 944
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 24 LCLDHSELCRGAQYHHVQIEYYGTCREMPECS 119
L LDH EL A+ + ++YYG C E E S
Sbjct: 419 LTLDHPELYTEARLSPLSLKYYGVCMENGEYS 450
>07_01_0263 - 1960935-1961174,1961293-1961328
Length = 91
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 72 RGGTAPRGTAPSGRGRGS 19
RG T+P+ TAP G GRGS
Sbjct: 16 RGTTSPKTTAPPGNGRGS 33
>06_01_0497 +
3555919-3557154,3557815-3558143,3558177-3558775,
3558919-3560393
Length = 1212
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 99 CKSRSTRSARGGTAPRGTAPSGRGRG 22
C+S +TR AR GT+P A G G G
Sbjct: 521 CRSAATRGARRGTSPLPPASGGGGAG 546
>01_05_0422 -
22018579-22018698,22019548-22019644,22019744-22019908,
22022274-22022339,22022441-22022540,22022662-22023304
Length = 396
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +3
Query: 303 DNDRFVSRHELFPIRAPLMSLEHC-----IAPFLDQCDADEDHRITLAE 434
D+D F+S HEL P+ L E A + + D D D R+TL E
Sbjct: 322 DSDGFISEHELEPVLDKLHLSERYYARQQAAHAISEADKDHDGRLTLDE 370
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 363 LEHCIAPFLDQCDADEDHRITLA--EWGKCLQLD 458
L H + FL CD+ + H L+ EW LQLD
Sbjct: 322 LSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLD 355
>01_01_0942 + 7428384-7429536,7429623-7430335
Length = 621
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 96 KSRSTRSARGGTAPRGTAPS 37
+SR T S+ GG APRG AP+
Sbjct: 54 RSRMTSSSGGGRAPRGRAPT 73
>02_04_0576 + 24009297-24009980,24010062-24010376
Length = 332
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 234 AESNLTRRWTNAAIWKWCDLDAHDNDRFVSRHELFPIRAPLMSLEHCIAPF-LDQCDAD 407
A + +T R AA+ CD D H + RHE P+ L PF Q AD
Sbjct: 78 APAAVTCRADAAALCAACDADIHSANPLARRHERLPVAPFFGPLADAPQPFPFSQAAAD 136
>01_06_1160 -
34996840-34996979,34997316-34997478,34997970-34998388,
34998413-34998620
Length = 309
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 150 CAAGSLTFRSRCTPAFPCKSRSTRSARGGTAPRGTAPSG-RGRGSAVGT 7
C G+ R+ +P +S ARG RGT +G RGRG T
Sbjct: 128 CGRGATAARANSSPYGGGRSAPAAGARGRGGGRGTQATGARGRGGRRST 176
>08_02_1014 - 23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 27.9 bits (59), Expect = 5.7
Identities = 22/61 (36%), Positives = 24/61 (39%)
Frame = -2
Query: 358 MSGARIGNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRRSARS 179
+ GAR G N D + SL H F Q R RLD V RRSAR
Sbjct: 913 LQGAREGWNQ-GDESSSLYTNQSKHQFSSKLTEQYRRRLDGTEHDPGEANSVLLRRSARE 971
Query: 178 R 176
R
Sbjct: 972 R 972
>08_02_0574 - 18867623-18868033,18869751-18870209
Length = 289
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 147 AAGSLTFRSRCTPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVGTP 4
AAGS+T A PC ST ++ + AP+ GR S+ G P
Sbjct: 79 AAGSVT-----PAAIPCAGSSTTASAPTSTSTRAAPACTGRSSSTGLP 121
>02_04_0203 -
20888010-20888162,20888242-20888469,20888969-20889073,
20889148-20889225,20889308-20889382,20890037-20890123,
20890216-20890283,20890396-20890483,20890583-20890683,
20890793-20890913,20891008-20891169,20891271-20891441
Length = 478
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 147 AAGSLTFRSRCTPAFPCKSRSTRSARGGTAPR 52
+AG L RSR + FP K+ +TRS R G R
Sbjct: 42 SAGGLRLRSRPS-RFPQKAATTRSGRAGAGAR 72
>02_01_0213 + 1416721-1417440
Length = 239
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -3
Query: 150 CAAGSLTFRSRCTPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVG 10
CA+G CT CK +A G AP A +G G G+AVG
Sbjct: 40 CASGKKD--EACTKM--CKEACGGAATDGHAPAAGAGAGAGAGAAVG 82
>01_06_1057 -
34142979-34143114,34143212-34143390,34143496-34143669,
34143757-34144005,34144108-34144233,34144341-34144565,
34144657-34144747,34144837-34144951,34145312-34145366
Length = 449
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 20 LPLPRPLGAVPRGAVPPRADRVLRDLQGNAGVQRERNVRLPAAHARLA 163
LP +PL P G ++L++ Q NA ++ N PAA AR A
Sbjct: 54 LPEGKPLQQAPAGRTANFGAQLLKNAQANAAANKQ-NAVAPAAVARPA 100
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 111 PAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVGTPR 1
PA P ++ RG A A +GRGRG G R
Sbjct: 441 PAAPASLSASGGERGCVAIANAAVAGRGRGRGSGAKR 477
>05_03_0475 +
14486969-14487140,14487215-14487338,14487424-14487559,
14487663-14488997
Length = 588
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -3
Query: 147 AAGSLTFRSR---CTPAFPCKSRSTRSARGGTAPRGTAPS 37
+A SL RSR P+ R+T A G ++PR TAP+
Sbjct: 253 SASSLVSRSRPSLTAPSSGALQRATPGAAGTSSPRSTAPA 292
>04_01_0360 - 4720997-4721812
Length = 271
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -3
Query: 159 SRACAAGSLTFRSRCTPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVG 10
S A G FR+ C A + S ARGG AP+ +G G G
Sbjct: 50 SPAARIGPSAFRAACDAAVGAPTSSLTEARGGDGD-AMAPAAQGDGDDDG 98
>02_01_0582 + 4315336-4315956,4316060-4316188,4316282-4316581
Length = 349
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 234 AESNLTRRWTNAAIWKWCDLDAHDNDRFVSRHELFPI 344
A + +T + AA+ CD D HD + RHE P+
Sbjct: 68 APAAVTCKADAAALCAACDSDIHDANPLARRHERVPV 104
>12_02_0989 - 25069052-25070134
Length = 360
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 147 AAGSLTFRSRCTPAFPCKSRSTRSARGGTAPRG-TAPSG 34
AA S F R + KS RGGT P G TAP G
Sbjct: 276 AAASRVFSFRSYRSAAAKSSPFSRRRGGTGPGGATAPGG 314
>07_01_0462 -
3497340-3497632,3497713-3497772,3497851-3498405,
3498695-3498874,3499059-3499223,3499315-3499360
Length = 432
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/44 (22%), Positives = 23/44 (52%)
Frame = +3
Query: 144 RRMRDWLFNIMRDLAERRELTPHYLRMEREAESNLTRRWTNAAI 275
+R R+W ++ ++ + R H R ++ ES + + TN+ +
Sbjct: 87 KRARNWYTSLTQEQKDERNKKDHERRKRKKEESQVLKSATNSGV 130
>04_04_0386 + 24865344-24865973,24866068-24866439
Length = 333
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 234 AESNLTRRWTNAAIWKWCDLDAHDNDRFVSRHELFPI 344
A + +T R AA+ CD D H + RHE P+
Sbjct: 68 APAAVTCRADAAALCAACDADIHSANPLARRHERLPV 104
>04_04_0353 - 24623452-24623691,24623871-24624134,24624264-24624449
Length = 229
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 267 AAIWKWCDLDAHDNDRFVSRHELFPIRAPL-MSLEHC 374
AA+ CD++ H ++ S+H+ P+ A L +L C
Sbjct: 22 AALCARCDVEIHAANKLASKHQRLPLDAALPAALPRC 58
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -2
Query: 250 VRLDSASRSMRR*WGVSSRRSARSRIMLNSQSRMRRGKS 134
V +D RS RR W RR RSR M R RG S
Sbjct: 152 VLVDERRRSWRRQWSWRRRRRRRSR-MCGGGGRRGRGSS 189
>03_02_0663 +
10256898-10258915,10259162-10259248,10259463-10259724,
10259802-10260111,10260535-10260645,10260861-10261090
Length = 1005
Score = 27.1 bits (57), Expect = 10.0
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +3
Query: 375 IAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRCDEFIDD--L*H--GALRILRSYL 539
+ P LD C DH LA + + E E +D CD F++ L H G R+LR L
Sbjct: 88 LEPALDACLRPVDHVKALAASFRRMSSAEAEGDDLCDVFLEQHALFHALGDARLLRRAL 146
>02_04_0545 + 23778769-23779245,23779395-23779688
Length = 256
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 267 AAIWKWCDLDAHDNDRFVSRHELFPIRAPLMSLEHC 374
AA+ CD++ H ++ +H+ P+ A L C
Sbjct: 22 AALCAACDVEVHAANKLAGKHQRLPLEALSARLPRC 57
>01_05_0126 -
18391879-18391937,18392021-18392102,18392508-18392667,
18392739-18392807,18392850-18392992,18393069-18393203,
18393283-18393341,18394090-18394187,18394347-18394510,
18394586-18394647,18394803-18394977,18396331-18396588,
18396694-18396841,18398458-18398813
Length = 655
Score = 27.1 bits (57), Expect = 10.0
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 343 IGNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVS 200
I S L ++ AS S ++ V RR +LDSA+ + RR WG S
Sbjct: 76 IARRSSPARQLVVAVASPSTELSRSSTVARR-QLDSAAVAGRRLWGTS 122
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,161,096
Number of Sequences: 37544
Number of extensions: 292455
Number of successful extensions: 1335
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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