Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G24
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 169 1e-42
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 169 1e-42
Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical pr... 39 0.002
AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical ... 30 1.3
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 29 2.9
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z48716-2|CAA88597.2| 169|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 9.0
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 27 9.0
AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 27 9.0
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 27 9.0
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 169 bits (411), Expect = 1e-42
Identities = 76/163 (46%), Positives = 108/163 (66%), Gaps = 3/163 (1%)
Frame = +3
Query: 3 EVYRQRCLCLDHSELCRGAQYHHVQIEYYGTCREMPECSENEMSDFPRRMRDWLFNIMRD 182
++YR+RCLC S+ C A V +EY G C+++ EC+E M+ FP RM DWLF +M++
Sbjct: 104 DLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKE 163
Query: 183 LAERRELTPHYLRMER---EAESNLTRRWTNAAIWKWCDLDAHDNDRFVSRHELFPIRAP 353
L +RREL H L E EAE++ ++ IWK+C+LD +D+ VS HEL PI AP
Sbjct: 164 LKKRREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAP 221
Query: 354 LMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRC 482
++ +E CI PFL+ CDA+ D I++ EWGKCL L E E+++RC
Sbjct: 222 VIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 169 bits (411), Expect = 1e-42
Identities = 76/163 (46%), Positives = 108/163 (66%), Gaps = 3/163 (1%)
Frame = +3
Query: 3 EVYRQRCLCLDHSELCRGAQYHHVQIEYYGTCREMPECSENEMSDFPRRMRDWLFNIMRD 182
++YR+RCLC S+ C A V +EY G C+++ EC+E M+ FP RM DWLF +M++
Sbjct: 104 DLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKE 163
Query: 183 LAERRELTPHYLRMER---EAESNLTRRWTNAAIWKWCDLDAHDNDRFVSRHELFPIRAP 353
L +RREL H L E EAE++ ++ IWK+C+LD +D+ VS HEL PI AP
Sbjct: 164 LKKRREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAP 221
Query: 354 LMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRC 482
++ +E CI PFL+ CDA+ D I++ EWGKCL L E E+++RC
Sbjct: 222 VIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264
>Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical
protein T04F3.2 protein.
Length = 260
Score = 39.1 bits (87), Expect = 0.002
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Frame = +3
Query: 93 TCREMPECSENEMSDF-PRRMRDWLFNIMRDLAERRELTPHYLRMERE---AESNLTRRW 260
T R P+C E + P+R+R N ++ R L ++ E + N T+
Sbjct: 112 TTRGKPKCEETPTTTVAPKRVRR--NNRCKEKKRTRFLRRLVSTLKSEMIMSGINATKVS 169
Query: 261 TNAAI-WKWCDLDAHDNDRFVSRHELFPIRAPLM---SLEHCIAPFLDQCDADEDHRITL 428
++AI WK+ L+ + N+ + R E P ++ L+ ++ C CD ++D ++T
Sbjct: 170 RDSAIRWKFNQLNINHNN-VLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNKDRKLTF 228
Query: 429 AEWGKCL 449
EW KC+
Sbjct: 229 DEWRKCI 235
>AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical
protein C54E4.2a protein.
Length = 226
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 276 WKWCDLDAHDNDRFVSRHELFPIRAPLMSLEHCIAPFLDQC-DADEDHRITLAEWGKCLQ 452
W + D + + + +S+ EL PI E C+ F+D C D D I++ EW C
Sbjct: 83 WMFNQWDGNQDGK-LSKAELRPIERG--GNEACVEEFIDMCDDMVVDGSISVDEWCDCFT 139
Query: 453 L-DEYELEDRCDEFIDDL 503
D+ E C + D+
Sbjct: 140 FSDDLRHEPPCHKAKHDV 157
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -2
Query: 334 NSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRRSARSRIMLNSQS 155
N R + + SR H + +RR R + SRS R SRR RSR S+S
Sbjct: 1511 NRSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRSRSR-ERYRSRRDRRSRTKSRSRS 1569
Query: 154 RMR 146
R R
Sbjct: 1570 RSR 1572
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -2
Query: 334 NSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRRSARSRIMLNSQS 155
N R + + SR H + +RR R + SRS R SRR RSR S+S
Sbjct: 136 NRSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRSRSR-ERYRSRRDRRSRTKSRSRS 194
Query: 154 RMR 146
R R
Sbjct: 195 RSR 197
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -3
Query: 162 ASRACAAGSLTFRSRCTPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVG 10
A+R A+ R R T S+ S+ G RGT + RGRGSA G
Sbjct: 54 AARERASPYSRSRIRSTAGTSDAGPSSSSSVRGRGTRGTTSARRGRGSARG 104
>Z48716-2|CAA88597.2| 169|Caenorhabditis elegans Hypothetical
protein F59B10.3 protein.
Length = 169
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 159 WLFNIMRDLAERRELTPHY 215
WLFN +D ++REL HY
Sbjct: 115 WLFNRSKDKQQKRELYEHY 133
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 114 TPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVGT 7
TP P S+R + GG PR G GRG GT
Sbjct: 686 TPRSPQDGMSSRGSSGGQTPR--QGGGGGRGGHFGT 719
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 114 TPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVGT 7
TP P S+R + GG PR G GRG GT
Sbjct: 686 TPRSPQDGMSSRGSSGGQTPR--QGGGGGRGGHFGT 719
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -3
Query: 171 C*TASRACAAGSLTFRSRCTPAFPCKS--RSTRSARGGTAPRGTAPSGRGRGSAVGT 7
C + +C GS + C+P+FP TR+AR G + T G +GT
Sbjct: 1864 CSNSICSCPQGSGVLNNVCSPSFPQNDNYNLTRTARPGDSCDNTIVCIGGSSCLIGT 1920
>AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical
protein C54E4.2b protein.
Length = 234
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 366 EHCIAPFLDQC-DADEDHRITLAEWGKCLQL-DEYELEDRCDEFIDDL 503
E C+ F+D C D D I++ EW C D+ E C + D+
Sbjct: 118 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDV 165
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 90 RSTRSARGGTAPRGTAPSGRGRG 22
R TRS RGG A G A G G G
Sbjct: 98 RDTRSRRGGYAEGGAAAGGGGGG 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,990,473
Number of Sequences: 27780
Number of extensions: 219744
Number of successful extensions: 747
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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