Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G23
(570 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 39 0.002
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 33 0.18
At2g35580.1 68415.m04357 serpin family protein / serine protease... 32 0.31
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 30 1.2
At1g64030.1 68414.m07252 serpin family protein / serine protease... 28 3.8
At5g49340.1 68418.m06105 expressed protein similar to unknown pr... 28 5.0
At4g36480.1 68417.m05180 aminotransferase class I and II family ... 27 6.7
At4g35110.2 68417.m04989 expressed protein 27 6.7
At4g35110.1 68417.m04988 expressed protein 27 6.7
At5g09290.1 68418.m01076 3'(2'),5'-bisphosphate nucleotidase, pu... 27 8.8
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 39.1 bits (87), Expect = 0.002
Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 2/148 (1%)
Frame = +3
Query: 72 ELTMDAKAISSAVAKFSAKFLN-ELDKSQNVVSSPLSAEYXXXXXXXXXXDPAHEELLTS 248
EL + ++ VA+ + K + ++ NVV SP+S EE+L+
Sbjct: 2 ELGKSIENQNNVVARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSF 61
Query: 249 LDIPNDDCIRSSFTSITSNLKSIQGITLNIANKVYLKEGPYELHSELKEDAVKVFDASFE 428
L P+ D + + I + L+ A+ V++ + Y L KE + AS
Sbjct: 62 LMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSSY-LKPSFKELLENSYKASCS 120
Query: 429 KLNFNDGAASAA-AINKWVESKTNDRIQ 509
+++F +N W + TN I+
Sbjct: 121 QVDFATKPVEVIDEVNIWADVHTNGLIK 148
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
Frame = +3
Query: 132 LNELDKSQNVVSSPLSAEYXXXXXXXXXXDPAHEELLTSLDIPNDDCIRSSFTSITSNL- 308
+ + ++ NV+ SP S +++L+ L + D + S + I S +
Sbjct: 22 ITTVSQNSNVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNSFSSEIVSAVL 81
Query: 309 ---KSIQGITLNIANKVYLKEGPYELHSELKEDAVKVFDASFEKLNFNDGAASAAA-INK 476
+ G L++AN ++ + K+ + A+ + +F A A +N
Sbjct: 82 ADGSANGGPKLSVANGAWIDKS-LSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVNS 140
Query: 477 WVESKTNDRI 506
W E +TN I
Sbjct: 141 WAEKETNGLI 150
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 31.9 bits (69), Expect = 0.31
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 288 TSITSNLKSIQGITLNIANKVYLKEGPYELHSELKEDAVKVFDASFEKLNFNDGAASA-A 464
T++ ++ + G T++ AN +++ E + K+ + + A+F +++F A
Sbjct: 78 TTVLADSTASGGPTISAANGLWI-EKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNR 136
Query: 465 AINKWVESKTNDRI 506
+N WVE +TN I
Sbjct: 137 EVNSWVEKQTNGLI 150
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 454 AAPSLKFNFSKEASNTLTASSFSSECSSYGPSF 356
AAP LK +F ASN+ T S S SS P+F
Sbjct: 279 AAPILKSDFRSSASNSKTTGSQGSVDSSSSPTF 311
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 28.3 bits (60), Expect = 3.8
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 6/156 (3%)
Frame = +3
Query: 120 SAKFLNELDKSQNVVSSPLSAEYXXXXXXXX-XXDPAHEELLTSLDIPNDDCIRSSFTSI 296
S L+ K NV+ SP S D ++L+ L + D +++ F +
Sbjct: 18 SGHVLSSAPKDSNVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVFREL 77
Query: 297 TSNLKSIQGIT----LNIANKVYLKEGPYELHSELKEDAVKVFDASFEKLNFNDGAASAA 464
S + + + T + AN +++ + + K+ F A + ++F A
Sbjct: 78 ASVVYADRSATGGPKITAANGLWIDKS-LPTDPKFKDLFENFFKAVYVPVDFRSEAEEVR 136
Query: 465 A-INKWVESKTNDRIQXXXXXXXXXXXXXXXXXNAL 569
+N WVE TN+ I+ NAL
Sbjct: 137 KEVNSWVEHHTNNLIKDLLPDGSVTSLTNKIYANAL 172
>At5g49340.1 68418.m06105 expressed protein similar to unknown
protein (emb|CAB82953.1)
Length = 457
Score = 27.9 bits (59), Expect = 5.0
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -3
Query: 505 IRSFVLLSTHLLIAAA--DAAPSLKFNFSKEASNTLTASSFSSECSSYGPSFKYTLFAMF 332
+ S LS LL +++ D +PSL S S LTA++F S SSY S T +
Sbjct: 21 LTSLFFLSLFLLSSSSLSDFSPSLIV--SSFTSRLLTAANFFSSPSSYTSSASDTTMFLS 78
Query: 331 SVIP 320
SV P
Sbjct: 79 SVSP 82
>At4g36480.1 68417.m05180 aminotransferase class I and II family
protein similar to Serine palmitoyltransferase 1 (EC
2.3.1.50) from Homo sapiens [SP|O15269], Mus musculus
[SP|O35704], Cricetulus griseus [SP|O54695]
Length = 482
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 358 FKYTLFAMFSVIPCIDFKLDVIEVNE 281
+ Y L MFS IPC K DVI +E
Sbjct: 175 YSYGLSTMFSTIPCFCKKGDVIVADE 200
>At4g35110.2 68417.m04989 expressed protein
Length = 386
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 491 FALNPFVDCSSRCSSIIKV*FLKRSIKHFNSIFLQFGMQF 372
+A NPF +C+S C I +K++ K +S L F F
Sbjct: 13 YADNPFHECASACLEKIAQGHVKKNTKKQSSRLLSFSGSF 52
>At4g35110.1 68417.m04988 expressed protein
Length = 386
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 491 FALNPFVDCSSRCSSIIKV*FLKRSIKHFNSIFLQFGMQF 372
+A NPF +C+S C I +K++ K +S L F F
Sbjct: 13 YADNPFHECASACLEKIAQGHVKKNTKKQSSRLLSFSGSF 52
>At5g09290.1 68418.m01076 3'(2'),5'-bisphosphate nucleotidase,
putative / inositol polyphosphate 1-phosphatase,
putative similar to SP|Q42546 3'(2'),5'-bisphosphate
nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana};
contains Pfam profile PF00459: Inositol monophosphatase
family
Length = 345
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 288 TSITSNLKSIQGITLNIANKVYLKEGPYELHSELKEDAVKVFDA 419
T + S+ K I I +IANK+ +K P +HS++K A+ DA
Sbjct: 217 TFVESSHKPIP-IHSSIANKLGIKAPPLRIHSQVKYAALARGDA 259
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,813,642
Number of Sequences: 28952
Number of extensions: 167069
Number of successful extensions: 481
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -